Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0377 ATGGATAAAAGAGTTGCCAAGCATGATGAAAAAAAGTCTGCGCCCAAAAATGAGACACAAAACTTGCCCCAACCCTTGCCATCTCCATGGTCTACTTCTACACAGGTTTATCATAATTTTGGGCCTGCTGCAACTTCCAGTGTAAATTCTGCTAGTTCTCTTTTTCATTCCCCCTGGTTTGGAAGCCAGATATGGCATATGCCAATTCCATATGATTCTGTACATCAAAGGAGGTCATTCTCCAATCTCTATCCTATGGCAACAGCAGGGTTTGGTCAGAGTTCTTTGTTAGTTTCTGTGGATGGATCGATACAAAGGGCATCTACTGAATTAAACAATAATTTAATGGGAAAAGGCCTTCAATCCCAGGAATCCAGGCCTTCAATCCTAAAAACCAATGGGGAAGGACTAACAAGGAGTGCGACTAGCAAAAGCAGGGAAACAACAGTTGTAGGCCATGATGTTAAGAATGCCGGTGGAGCAACAAAATTTAAAATAAAGGATTTGCCTTCAGTTAAGCCGCAGCAATCCAGTATGATGCCATTGCCTGGAAATGGGGGAGGTGTACAGAATGTGATTAGTAATGAAAATCGCAATGCTGTTCATGAGAATAGAAATATTGCATCGGATCATTTTGAAGCAAATCCAACTGAGCTGAATCAGAAATTGACTACAGCTCCCAATGCAACTGGCAATAATCCACATCTTAAAGAAAAGGAGAGTGATGAAACAAAAGAGAAAAGAAAAAGGCAGGAAAATAAGATATCAGCCAAGAGAACAAAGAGGAAGATCATGAAGCTGCAGGATATCCCTTCAACTAGGCAGGGGCATTCCAGTATGATGCATGGAAATGGGGGAGCTTCACAGAATGTGACTAGCAATGAAACTTGCAATGCTGTTCATGAGAATAGAAACATTGCATCAGATCATTTTGAAGCAAATCCAACTGAGCTGCAGAATCAGAAGTTGGGTACAGAACCCAATGCATCTGGCAATAAGCGTCAACTTAGAAAAAAGGAAACTGCTGAAGAAAAAGAACAAAGAAGAAAACAGCAAAAGAAGATAGCATCTAAGAGATCAAGGATGAAGATAAAGATGGAACGTGAAAAGTTAATTGATTCCTTGGAGAGTCTTGATGATGAAAAGGCTGCGCTCAGGGAAGAGCTTCATGACCGTACTATTGAGTGTGAGAAGATCGAAAAAGAAAACAATGCCTTACTGGCAGAACTCATTGAGGAATATGGTGAAGAAACAATAATGAACCTTCTGAATGCACAGTCTACTGACTCAGTTGCTGGTGGTGGTCAAGGCTCAAAAAACAGTTGA 1326 0.408 MDKRVAKHDEKKSAPKNETQNLPQPLPSPWSTSTQVYHNFGPAATSSVNSASSLFHSPWFGSQIWHMPIPYDSVHQRRSFSNLYPMATAGFGQSSLLVSVDGSIQRASTELNNNLMGKGLQSQESRPSILKTNGEGLTRSATSKSRETTVVGHDVKNAGGATKFKIKDLPSVKPQQSSMMPLPGNGGGVQNVISNENRNAVHENRNIASDHFEANPTELNQKLTTAPNATGNNPHLKEKESDETKEKRKRQENKISAKRTKRKIMKLQDIPSTRQGHSSMMHGNGGASQNVTSNETCNAVHENRNIASDHFEANPTELQNQKLGTEPNASGNKRQLRKKETAEEKEQRRKQQKKIASKRSRMKIKMEREKLIDSLESLDDEKAALREELHDRTIECEKIEKENNALLAELIEEYGEETIMNLLNAQSTDSVAGGGQGSKNS* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0377 441 MobiDBLite consensus disorder prediction 223 292 - -
Gso12g0377 441 Coils Coil 361 402 - -
Gso12g0377 441 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 343 406 IPR004827 GO:0003700|GO:0006355
Gso12g0377 441 MobiDBLite consensus disorder prediction 1 16 - -
Gso12g0377 441 MobiDBLite consensus disorder prediction 118 148 - -
Gso12g0377 441 PANTHER G-BOX-BINDING FACTOR 3-RELATED 268 428 IPR044827 GO:0003700|GO:0006355|GO:0043565
Gso12g0377 441 PANTHER G-BOX-BINDING FACTOR 3-RELATED 11 261 IPR044827 GO:0003700|GO:0006355|GO:0043565
Gso12g0377 441 SMART brlzneu 341 405 IPR004827 GO:0003700|GO:0006355
Gso12g0377 441 MobiDBLite consensus disorder prediction 17 34 - -
Gso12g0377 441 MobiDBLite consensus disorder prediction 271 292 - -
Gso12g0377 441 MobiDBLite consensus disorder prediction 332 351 - -
Gso12g0377 441 MobiDBLite consensus disorder prediction 118 149 - -
Gso12g0377 441 PANTHER G-BOX-BINDING FACTOR 1 11 261 - -
Gso12g0377 441 PANTHER G-BOX-BINDING FACTOR 1 268 428 - -
Gso12g0377 441 Coils Coil 241 261 - -
Gso12g0377 441 MobiDBLite consensus disorder prediction 318 362 - -
Gso12g0377 441 MobiDBLite consensus disorder prediction 235 253 - -
Gso12g0377 441 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0377 Gso-Chr12 3310137 3317123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0377 339 422 bZIP Transcription Factor Family AT4G36730 39.286 5.60e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0377 - K22649 ccaj:109801299 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0377 12 3310137 3317123 Gso11g1026 11 9178694 9184345 GST