Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0364 ATGACAGAGTCGGCAAGGCCAAGTGTGAGTTTGAAACTTGTTGTGTTAGTAGTTATTCTAGTCGTCTCCGCGTTGCTGATTCTGCTTCTGATTTTCTTCCTCTGCTTCCGCAAGACGCGGAACCTGGTGGCCAAACACAGCTCAGGGAGCATCCCTCTGGTGTCCAAGGAGATCACCATGGTCAAGGCCTCGGATCCGAAGAAGATGGAGGAGGCGGAGGTCAAGGTTGAAATTGGTGGAGCCCAGCACCACCGAAGCAGCGAACTAGTGTCGGTGGAGGATCCCGATATAGGGTGGGGCCGCTGGTACACCATTTGGGAAGTGGAACTCGCCACGCGCGGGTTTGCGGAAGGGAATGTTATTGGAGAAGGAGGCTATGCCGTTGTGTACAGAGGTGTTCTGCACGATGCTTCCGTCGTGGCTGTCAAGAATCTTCTGAACAACAAGGGTCAAGCTGAGAAGGAGTTTAAAGTGGAGGTTGAAGCTATTGGAAAAGTGAGGCATAAAAATTTGGTTCGTTTGGTAGGATATTGTGCAGAAGGTGCTCGAAGGATGCTTGTTTATGAGTATGTTGACAACGGAAACTTGGAACAATGGCTGCATGGTGATGTAGGACCAGTTAGCCCCTTGACATGGGATATTCGAATGAGAATTGCTATTGGGACTGCAAAAGGGTTAGCCTATTTGCATGAAGGTTTAGAGCCCAAAGTTGTGCACCGGGATATAAAATCCAGTAACATTCTTTTAGATAAAAACTGGAATGCCAAAGTATCAGATTTTGGACTAGCCAAGCTCTTAGGATCTGAGAAATCCCATGTGACTACGCGTGTAATGGGAACATTTGGATATGTTGCACCAGAGTATGCAAGCTCGGGTATGCTTAATGAGCGCAGTGATGTGTATAGCTTTGGAGTTCTTCTCATGGAGATAATCACAGGAAGAAGCCCCATTGATTATTCAAGACCACCCGGAGAGATGAATTTGGTAGATTGGTTTAAGGCAATGGTAGCAAGTCGTCGCAGTGAGGAGCTAGTTGATCCTTTAATTGAGATTCCTCCCCCTCCAAGATCTTTGAAGAGAGTTTTATTGATTTGTCTGCGCTGTATAGACATGGATGTCGTTAAGCGACCAAAGATGGGTCAAATTATTCATATGCTTGAGACAGATGATTTCCCCTTTCGTTCTGAGCTACGTTCAGTTAGAGAAAAAGATCCTGTGCCTTCTCATGCAGATGTTTCCATTAAAGTTCCTTATCCACCAACAAAGCATGCAGAAACCGTAGAAAAATCAAGATGGAGATAA 1302 0.4593 MTESARPSVSLKLVVLVVILVVSALLILLLIFFLCFRKTRNLVAKHSSGSIPLVSKEITMVKASDPKKMEEAEVKVEIGGAQHHRSSELVSVEDPDIGWGRWYTIWEVELATRGFAEGNVIGEGGYAVVYRGVLHDASVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVRLVGYCAEGARRMLVYEYVDNGNLEQWLHGDVGPVSPLTWDIRMRIAIGTAKGLAYLHEGLEPKVVHRDIKSSNILLDKNWNAKVSDFGLAKLLGSEKSHVTTRVMGTFGYVAPEYASSGMLNERSDVYSFGVLLMEIITGRSPIDYSRPPGEMNLVDWFKAMVASRRSEELVDPLIEIPPPPRSLKRVLLICLRCIDMDVVKRPKMGQIIHMLETDDFPFRSELRSVREKDPVPSHADVSIKVPYPPTKHAETVEKSRWR* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0364 433 ProSiteProfiles Protein kinase domain profile. 115 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g0364 433 MobiDBLite consensus disorder prediction 402 433 - -
Gso12g0364 433 SMART serkin_6 115 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g0364 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Gso12g0364 433 Gene3D Phosphorylase Kinase; domain 1 74 190 - -
Gso12g0364 433 Gene3D Transferase(Phosphotransferase) domain 1 191 398 - -
Gso12g0364 433 PIRSF TyrPK_CSF1-R 118 208 - -
Gso12g0364 433 PIRSF TyrPK_CSF1-R 206 391 - -
Gso12g0364 433 PIRSF TyrPK_CSF1-R 1 40 - -
Gso12g0364 433 PANTHER OS01G0323000 PROTEIN 1 433 - -
Gso12g0364 433 SUPERFAMILY Protein kinase-like (PK-like) 98 394 IPR011009 -
Gso12g0364 433 PANTHER RECEPTOR-LIKE KINASE 1 433 - -
Gso12g0364 433 CDD STKc_IRAK 121 387 - -
Gso12g0364 433 ProSitePatterns Protein kinases ATP-binding region signature. 121 143 IPR017441 GO:0005524
Gso12g0364 433 Pfam Protein tyrosine and serine/threonine kinase 118 386 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0364 Gso-Chr12 3196140 3200270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0364 12 389 Trihelix Transcription Factor Family AT1G70460 41.457 7.09e-94 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Gso12g0364 PK_Tyr_Ser-Thr 1.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0364 - - gmx:100786349 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0364 12 3196140 3200270 Gso11g1010 11 9009055 9013390 GST