Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0359 ATGTTTTTTTCATGTAAAACATACAATCTCTACCTTCCCTGCTCCTCTGTTCCCCTGCGCAATTCAACATCATGCACCATTTTCAATTGTCAAAACCCAAACGAGCATCACTCCATTCTCCGCAAACACAATTCCAAATCCACAGCATATCTCCTTCACCACCTCTCCCACAAGGATGGGGCACCCAACCCCATTCCCATTCCCAAACCCAGCGAGCTTCAAGACCCAATGCCCCACGAAGAAAAAGTCAAGGTTTTGGAGCTTTCCCTCGTCAGAAAAAGGACCCCTCAGTTCCCTGGCTCCATCTACGCTCAATCTCCCAGTGACTCCGATGTGGGTTCTTCTCTGCCCCCTCTCCGCACTCTGTTTCAATCAAGTGATGATAAAGACGACGACGAGGAGGAGAAGGAGATGATAATGCGCGCTCTCGATATTCGGAGGAAGGTCACTGAAGAGGTTTTCAAAGAAGCCATGCGAAAGGGAAAGTTTGGAATCACTTACACTACCAATTTGGTTGGCAGGTTATCCGGTTTCATTGATTACATCATGATTGAAGCTGCTAACTTGAAGAGATTGCCCGAATATTCAAACTCCACCTTCAATTTGCGCGCCAAAATTGTCATTGATGACTCTAAAGTTGTGCCACTTATTAGATGGTTGAAGCACAATGCACTATCATATCCCCGGATAGCGAAGCTTATTTTGATGTCAAGTGGAAAACTTGAGGCTGTCAGGAGTTTTGTCGAGTGGTTGAAATCGGTACATGTGAAAGGAGAGTTTCTCGGTGTTGTAATGGTGAATGCTGGGGAAAATATTTTCCAGCGCAGCCATGTGGAGCTGGATGAGATTGTTCTGTATTTGGAGTCCAATGGAGTCAGGAGGGATTGGATGGGTTATGTCATTAGTCGTTGTCCTCAGTTATTGTCTTATAGCTTAGATGAAGTGAAGAATCGTGCACAGTTCTACCATGATATGGGCTTAAATGAGAAAGATTTTGGCACAATGGTTTTTGATTTTCCTAAAGTTCTTGGTTACTATTCGCTGGAAGAAATGAATGCAAAGGTTAATTACTTAAAAGAATTTGGGCTTCAAACTAAGGATGTTGGCAGATTGCTTGCTTTTAGACCACAATTGATGGCATGCAGCATTGAAGAACAATGGAAGCCTCTTGTTAAGTATCTGTATTATTATGGGATCACTCAAGATGGTATGAGGAGAATGCTTACCATTAAACCAATGGTCTTTTGTGCTGACTTGCAGATGACTATTGTGCCAAAGGTACGGTTTTTTGAGGATATAGGGGTGCGCAATGATGCGATTGGCAACATGCTTGTGAAGTTTCCTCCTCTACTCACTTACAGTCTGAACAAGAAGATTAGACCAGTGGTCATATTCTTGATGACCAAAGCTGGAGTCAGTGAGAAAGATATCGCCAAGGTTGTAGCTCTTGGACCTGAGCTGTTGGGATGCAATATAGCACATAAGCTTGATCTAAATGTAAAATATTTTTTGTCTCTTGGCATACGTCTTCGGCAATTGGGTGAGATGATTGCTGATTTTCCAATGCTGCTCAGATACAATCCAGATGTCCTTCGTCCCAAATATGTTTATTTGCGAAAAACAATGGTCCGGCCTTTGCAAGATCTCATTGAGTTTCCAAGGTTTTTCAGCTATTCTCTTGAGGGTCGAATTATCCCAAGACATAAGGTTCTAGTGGAGAATCAGATTAATATTAAGCTAAGATACATGTTGACTAGCACTGACGAAGAATTCAACAAAATGGTCAAGGGCATAATTAGAAAGCGCCTCAGATTTGAATCTGCTGTCACAAATGAGGATACTACGTTAATACTGGAGACTACACCCCAGGCATAA 1875 0.4251 MFFSCKTYNLYLPCSSVPLRNSTSCTIFNCQNPNEHHSILRKHNSKSTAYLLHHLSHKDGAPNPIPIPKPSELQDPMPHEEKVKVLELSLVRKRTPQFPGSIYAQSPSDSDVGSSLPPLRTLFQSSDDKDDDEEEKEMIMRALDIRRKVTEEVFKEAMRKGKFGITYTTNLVGRLSGFIDYIMIEAANLKRLPEYSNSTFNLRAKIVIDDSKVVPLIRWLKHNALSYPRIAKLILMSSGKLEAVRSFVEWLKSVHVKGEFLGVVMVNAGENIFQRSHVELDEIVLYLESNGVRRDWMGYVISRCPQLLSYSLDEVKNRAQFYHDMGLNEKDFGTMVFDFPKVLGYYSLEEMNAKVNYLKEFGLQTKDVGRLLAFRPQLMACSIEEQWKPLVKYLYYYGITQDGMRRMLTIKPMVFCADLQMTIVPKVRFFEDIGVRNDAIGNMLVKFPPLLTYSLNKKIRPVVIFLMTKAGVSEKDIAKVVALGPELLGCNIAHKLDLNVKYFLSLGIRLRQLGEMIADFPMLLRYNPDVLRPKYVYLRKTMVRPLQDLIEFPRFFSYSLEGRIIPRHKVLVENQINIKLRYMLTSTDEEFNKMVKGIIRKRLRFESAVTNEDTTLILETTPQA* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0359 624 MobiDBLite consensus disorder prediction 99 135 - -
Gso12g0359 624 MobiDBLite consensus disorder prediction 99 122 - -
Gso12g0359 624 SMART mt_12 405 436 IPR003690 GO:0003690|GO:0006355
Gso12g0359 624 SMART mt_12 333 364 IPR003690 GO:0003690|GO:0006355
Gso12g0359 624 SMART mt_12 441 473 IPR003690 GO:0003690|GO:0006355
Gso12g0359 624 SMART mt_12 514 544 IPR003690 GO:0003690|GO:0006355
Gso12g0359 624 SMART mt_12 478 509 IPR003690 GO:0003690|GO:0006355
Gso12g0359 624 SMART mt_12 546 577 IPR003690 GO:0003690|GO:0006355
Gso12g0359 624 SMART mt_12 298 328 IPR003690 GO:0003690|GO:0006355
Gso12g0359 624 SMART mt_12 369 400 IPR003690 GO:0003690|GO:0006355
Gso12g0359 624 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF2, CHLOROPLASTIC 62 613 - -
Gso12g0359 624 Pfam mTERF 364 591 IPR003690 GO:0003690|GO:0006355
Gso12g0359 624 Pfam mTERF 228 360 IPR003690 GO:0003690|GO:0006355
Gso12g0359 624 Gene3D Transcription termination factor 3, mitochondrial 374 599 IPR038538 -
Gso12g0359 624 PANTHER CGI-12 PROTEIN-RELATED 62 613 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0359 Gso-Chr12 3166031 3169827 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gso12g0359 mTERF 2.7e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0359 K15032 - gmx:100813633 912.909