Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0336 ATGGCTTCCTCAAGTGGAACATCTTCAGGGTCATCTCTGCTTCAGAACTCTGGTTCTGAGGAGGATTTGCAGGCGGTGATGGATCAGAGAAAGAGGAAGAGAATGATATCAAACCGCGAATCTGCACGGCGATCTCGCATGAGGAAGCAGAAGCACTTGGACGATCTTGTTTCCCAAGTGGCTCAGCTCAGAAAAGAGAACCAACAAATACTCACAAGCGTCAACATCACCACGCAACAGTACCTGAGCGTTGAGGCTGAGAACTCGGTGCTTAGGGCTCAGGTGGGTGAGCTTAGTCACAGGTTAGAGTCTCTGAATGAGATCGTTGACGTGTTGAATGCCACCACTGTGGCGGGTTTTGGAGCAGCAGCAACATCGAGCACCTTCGTTGAGCCAATTAATAATAATAGCTTCTTCAACCCGTTGAATATGGGGTATCTGAACCACCCTATTATGGCTTCTGCGGATATATTGCAGTATTGA 483 0.4824 MASSSGTSSGSSLLQNSGSEEDLQAVMDQRKRKRMISNRESARRSRMRKQKHLDDLVSQVAQLRKENQQILTSVNITTQQYLSVEAENSVLRAQVGELSHRLESLNEIVDVLNATTVAGFGAAATSSTFVEPINNNSFFNPLNMGYLNHPIMASADILQY* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0336 160 PANTHER BZIP TRANSCRIPTION FACTOR 1 158 - -
Gso12g0336 160 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Gso12g0336 160 SUPERFAMILY Leucine zipper domain 30 82 IPR046347 GO:0003700|GO:0006355
Gso12g0336 160 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Gso12g0336 160 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Gso12g0336 160 MobiDBLite consensus disorder prediction 1 23 - -
Gso12g0336 160 Coils Coil 46 73 - -
Gso12g0336 160 Pfam bZIP transcription factor 30 77 IPR004827 GO:0003700|GO:0006355
Gso12g0336 160 MobiDBLite consensus disorder prediction 1 49 - -
Gso12g0336 160 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Gso12g0336 160 MobiDBLite consensus disorder prediction 24 49 - -
Gso12g0336 160 Gene3D - 28 87 - -
Gso12g0336 160 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0336 Gso-Chr12 2982769 2984238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0336 24 160 bZIP Transcription Factor Family AT4G34590 56.115 7.00e-50 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso12g0336 bZIP_1 2.6e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0336 K25786 - gmx:100101862 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0336 12 2982769 2984238 Gso11g0985 11 8796893 8798755 GST