Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0327 ATGGTTCAAAGAATGGTTCTAAGCAAGCTTGGTATCCAAGCTGATCATGTCAAATCTGACAAGTGCTTAGCAAACCTGAAGCCATATTCTTCTCAGTACCAAGATGGCAAAACCAAAGGAACTGATAAGGTGAAGAAAATGATGAAGTCAAGGTCATTTCAGCTTTCAGATTTCGAGCCTCCTCAATCACCACCTTCGGTCAGGAGCTTGTCCCAGCCAAGAAAGCCATCACCTCTTCATGTTCCAACTACTGCAGCATCCCCACAACAGCAGAAGGCTATGGTCAGAAGGTCACCCAATTACATGAAGCCTACCAGCAGTTCAGATGCAAAAAAGGAGCTTTTGCCGGTTAGTCATCGGAATACCCAATCTAGTTCAGATGGTAAGAGTCTACCACAAAAATGTATGAGAAATTCAAAAGCTAGCTATGTTTCTTGCAAAGAGCCTGCAAAAACTTTGTCAAGATCATCTAGTGTGAATTCAATGAGAACATTAACAAAGACTCCTAGTTTCAAGCCTTGTAAAGCTTGTTCAAGAGAATTCACATCAGCAGTTCTGTTTGAAGATGTGAATGCACCAGAGAGAGCTACCTGCTCTTCAACTTTGAAAGACTGCAAGTTTCCCGAGTACCTCATGCTTGACCCTGGGGGAACTGAGTCTGAGGGAGTTTCACTTATGAAGGTTTGCCCATATACATATTGTTCTCTTAATGGCCATGGTCATGGTCATTCTCCTTTGCCTCCATTGAAGAGCTTCATGTCAGCAAGGAGGCATCTTTTGGAGACTCAGAAGAATATAAAGGCGGAAGTTGCGAGCCCTCAAAGATGGAAGGTGCCCCCCTGTGATACAAAAAAAGACTCTTATAGTGAGCAGATTGTCTTTCATGGAAAACCTGCATGTGATGAAGCTGATACAGGTAATCCAACAATCACTCCCTTGGCACAAGAAATTGGTATGGATTTCTTCTTTGAAATCTATGCTAAGGAAAGGGAAGGAGATGGCAAAATGGGAAAATTCAACTCTTTCAAAGACCTTGAGGAGCAAGAAGATATCAATTTTGCAAATGACGAGAATGACATTGCAGCAGAAGAGGATGGAGTCAAGCAAGTTACTCCCGGAGTGACTCGTGACCTCCCGAAGTCTCAGATCAATTTCGAGGAGGATTTCAAAAACTATTTTGCTGATGCTGCTGCAATTGAAGCAAATAGCAAGGGGGGCTTTCATCTAGGACAAAATGCTGAAGATGCAGATGAAAACCAGCCACCTAGCTGGTTTCATGAAGAAACCTGTTCAGGAAGCTGCTGCAATGAGACTAGCTATGATTGGGAACAGATGGAGAATATTGACTTGGATGAGTCTGATTCCCAATATAGTGATATGGACTGGGAGGAGGAACACTTCTGTGAATTCAACCATGAGGACGATACTGATTCTTCCATCTGCTCAATGGAGGAAACTGACTCAAAACTTGAGTCCTTATCAGAGAGTTCACATGATATATCTGAAATGCGGTTACACGACATCGTTAGCAGTCAATATGCAGACATTCTGGTTGAAGAAGCACTCCAAGAAGTTGAAGAAGAGAAAAGTACCTGTTTTGATGCACAACCTCATTGCACTAATTCTGTCCTGGAAGACACAAGTGAAAGTATCGAGTTTGTGACTCAAGAAACAGATTATCCATCCAATGATACAAGTTCTGAGAATGACCAATCTACTTCAACTGAGGAAGTATTTCAGCATCTGATAAATGCAGAAGATAACAGCAGAGAAAATGAAAAACATGTGGATTATGAGGTCAGTTGTGTTTCAATGGTACTTGATGAAGTTGAAAATAGTGAAGGCCACAAAACTAGTGAAATTTGTGAGATTGATGAGAGCAGTGAAGACAGAAATGCAAGCCTAGAGAATGATGATGATAATGGAATTAGCCAGGAGAACCAAATTCACTCGTCTGAAGTGCCAGAAGAAAGCACCATTGTTGTTCAGGAGCAGAAATTATCGGAGGAAAATCAAGTTAAAGGTAGTAAGTTGCCGAGCACAGGTGGTGGTGAAGAGCAGCACACGGGCAATAATAGGCAATGGGGAACTAAGCGGAAGAGACCTATGGAAGAGGATGAGGAAATGAGAAAGATCAACCCACGAAAGCCAAATTTCCTGCCCTTGGTTATTGAGCCAGAACCAGAGAAAGTTGAACTGAAGCACCAAATGATAGATGAAAGAAAAGATGCAGAGGAATGGATGCTTGATTTCGCTCTCAGACAAGCTGTCACGAGACTTGCTCCAGCAGGGAAAAGGAAGGTGTCATTGCTGGTTGAAGCTTTTGAAACAGTAATGTCAATGCCCAAATGTGAAGCCCGTATGAAAAATGATTCACCCTTTGCTCATGCAAGGCCTATTCAAGCGTGTAGCTGA 2415 0.4236 MVQRMVLSKLGIQADHVKSDKCLANLKPYSSQYQDGKTKGTDKVKKMMKSRSFQLSDFEPPQSPPSVRSLSQPRKPSPLHVPTTAASPQQQKAMVRRSPNYMKPTSSSDAKKELLPVSHRNTQSSSDGKSLPQKCMRNSKASYVSCKEPAKTLSRSSSVNSMRTLTKTPSFKPCKACSREFTSAVLFEDVNAPERATCSSTLKDCKFPEYLMLDPGGTESEGVSLMKVCPYTYCSLNGHGHGHSPLPPLKSFMSARRHLLETQKNIKAEVASPQRWKVPPCDTKKDSYSEQIVFHGKPACDEADTGNPTITPLAQEIGMDFFFEIYAKEREGDGKMGKFNSFKDLEEQEDINFANDENDIAAEEDGVKQVTPGVTRDLPKSQINFEEDFKNYFADAAAIEANSKGGFHLGQNAEDADENQPPSWFHEETCSGSCCNETSYDWEQMENIDLDESDSQYSDMDWEEEHFCEFNHEDDTDSSICSMEETDSKLESLSESSHDISEMRLHDIVSSQYADILVEEALQEVEEEKSTCFDAQPHCTNSVLEDTSESIEFVTQETDYPSNDTSSENDQSTSTEEVFQHLINAEDNSRENEKHVDYEVSCVSMVLDEVENSEGHKTSEICEIDESSEDRNASLENDDDNGISQENQIHSSEVPEESTIVVQEQKLSEENQVKGSKLPSTGGGEEQHTGNNRQWGTKRKRPMEEDEEMRKINPRKPNFLPLVIEPEPEKVELKHQMIDERKDAEEWMLDFALRQAVTRLAPAGKRKVSLLVEAFETVMSMPKCEARMKNDSPFAHARPIQACS* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0327 804 MobiDBLite consensus disorder prediction 54 134 - -
Gso12g0327 804 Pfam Plant calmodulin-binding domain 697 780 IPR012417 GO:0005516
Gso12g0327 804 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 804 IPR044681 GO:0005516
Gso12g0327 804 MobiDBLite consensus disorder prediction 555 577 - -
Gso12g0327 804 MobiDBLite consensus disorder prediction 55 107 - -
Gso12g0327 804 MobiDBLite consensus disorder prediction 610 709 - -
Gso12g0327 804 MobiDBLite consensus disorder prediction 638 691 - -
Gso12g0327 804 MobiDBLite consensus disorder prediction 117 134 - -
Gso12g0327 804 PANTHER PLANT CALMODULIN-BINDING-LIKE PROTEIN 1 804 - -
Gso12g0327 804 SMART CaM_binding_2 667 780 IPR012417 GO:0005516
Gso12g0327 804 MobiDBLite consensus disorder prediction 610 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0327 Gso-Chr12 2914507 2917893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0327 686 804 Calmodulin-binding Proteins AT2G38800 46.667 3.07e-28 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0327 - - gmx:102670203 1606.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0327 12 2914507 2917893 Gso11g0975 11 8722724 8726042 GST