Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0324 ATGGGAGAGGTAGCGCGTGGAGGTTGTTGCCCTCCGATGGATCTGTTCCGTTCGGAGCCGATGCAACTGGTTCAGCTCATCATCCCCATCGAATCCGCTCACCGCACTGTCTCCTACCTCGGCGACCTTGGCCTCCTTCAGTTCAAAGATCTCAATGCAGACAAGAGTCCTTTTCAGCGGACCTATGCAGCTCAGATAAAAAGATGTGGAGAGATGGCTCGTGGATTGCGTTTTTTCAAGGACCAAATGTTGAAAGCTGGTGTTTCACCAAAATATTCCACAACACCAGTTGATTTGAACATTGATGACCTTGAGGTAAAGCTTACAGAAATTGAGTCAGAGTTAACTGAGATGAATGCAAATGGTGAAAAGTTGCAACGGTCATACAACGAGCTTGTGGAGTATAAGCTTGTTCTGCAGAAGGCTGGTGAGTTTTTCCACTCAGCTCAAAGTCGAGCCTTAGAGCAGCAGAGAGAACAGGAATCATGTCATCTGAGTGGTGAATCTATGGAAACACCTTTATTACAGGACCAAGAATTGTCTATTGATTCATCAAAGCAAGTTAAGTTGGGGTTTTTAGCAGGTCTTGTTCCCAGGGAAAAGTCCATGGTATTTGAGAGAATTTTATTTCGTGCTACTAGAGGAAATGTATTTTTGAGGCAGGCTACTGTTGAGGATCCCGTCACAGACCCTGTTTCTGGAGAAAAGACTGAGAAAAATGTTTTTGTGGTCTTCTATGCTGGTGAAAAAGCAAAAGCTAAGATTCTGAAAATATGTGAAGCCTTTGGTGCTAATCGTTACCCTTTTGCTGAGGAACTTGGAAAGCAAGCTCAAATGATTACAGAGGTTTCTGGAAGACTTTTAGAATTGAAGACCACTATAGACGCTGGATTACTGCATCGGGATAACTTGCTAAATACTATTGGGGCTCAATTTGAGCAATGGGATGCTTTGGTGAGGAAGGAGAAATCTATTCATCATACCCTGAACATGCTGAGCCTTGATGTAACAAAAAAATGTCTTGTGGCTGAGGGGTGGAGTCCTGTTTTTGCAACTAAGCAGATCCAGGATGCATTACAGCGGGCAGCATTGGACTCTAATTCTCAAGTCAATGCCATTTTCCAAGTTTTGCAAACTAGGGAGTTGCCACCTACATATTTTCGCACAAACAAATTTACTTCTTCTTTTCAAGGAATTATTGATTCATATGGGGTTGCTAAGTATCAGGAGGCAAATCCGACTGTGTATACTGTAGTTACCTTTCCATTTCTTTTTGCTGTAATGTTTGGTGATTGGGGTCATGGAATATGTTTACTACTGGCAGCTCTATATTTCATAATCAGGGAGAAGAAACTTTCTAGCCAGAAGCTTGATGACATCACGGAGATGACTTTTGGAGGTCGTTATGTTATTTTGTTGATGGCTATATTCTCAATCTACACTGGCTTTATCTATAATGAGTTCTTTTCTGTCCCATTTGCAATCTTCGCTCCCTCTGCTTATGAATGTCGTGACCTTTCTTGCAGGGATGCTACAACAGTGGGCCTGATAAAAGTGCGTGACACTTATCCTTTTGGAGTGGATCCTGTGTGGCACGGCACACGAAGTGAACTACCATTCCTAAACTCATTGAAAATGAAAATGTCTATTCTTCTTGGAGTTGCTCAAATGAACCTTGGAATTGTGATGAGCTATTTCAATGCCATATTCTTTAGAAATAGCGTAAATGTGTGGTTCCAGTTCATTCCCCAGATGATATTTCTTAACAGTTTATTTGGTTACCTATCCCTTCTTATTATTGTCAAGTGGGCCACTGGTTCTCAAGCTGATTTGTACCATATTCTGATCTACATGTTCCTGAGCCCAACAGATGATTTGGGTGAGAACCAACTCTTTGCTGGTCAGAAAAATCTGCAGCTTGTGCTTTTACTTCTGGCTGTTATCTCTGTGCCCTGGATGCTATTGCCAAAACCTTTTATTTTGAAGAAGCAACATGAAGCTAGGCATGGGGTTGAATCCTATGAACCACTTCAAAGTACAGATGAGAGCTTGCAAGTGGAGTCAAACCATGATTCCCATGGTCATGAGGAATTTGAGTTCAGCGAAGTATTTGTACATCAACTTATACATACCATAGAATTTGTACTAGGAGCAGTCTCTAATACAGCTTCTTACCTCCGTCTATGGGCCCTTAGTCTCGCTCATTCAGAGTTATCAAGTGTATTCTATGAGAAGGTTCTGATGATGGCATGGGGGTACAATAACGTGATTATCCTGATAGTGGGTCTCATTGTCTTCATTTTTGCTACCGTGGGAGTGTTACTTGTCATGGAAACTCTCAGTGCCTTTTTGCATGCGTTACGTCTTCACTGGGTGGAGTTTCAAAACAAGTTTTATGAGGGTGATGGATACAAGTTCCACCCTTTCTCGTTCTCCTGGCTGGATGATGAGGAATGA 2457 0.4208 MGEVARGGCCPPMDLFRSEPMQLVQLIIPIESAHRTVSYLGDLGLLQFKDLNADKSPFQRTYAAQIKRCGEMARGLRFFKDQMLKAGVSPKYSTTPVDLNIDDLEVKLTEIESELTEMNANGEKLQRSYNELVEYKLVLQKAGEFFHSAQSRALEQQREQESCHLSGESMETPLLQDQELSIDSSKQVKLGFLAGLVPREKSMVFERILFRATRGNVFLRQATVEDPVTDPVSGEKTEKNVFVVFYAGEKAKAKILKICEAFGANRYPFAEELGKQAQMITEVSGRLLELKTTIDAGLLHRDNLLNTIGAQFEQWDALVRKEKSIHHTLNMLSLDVTKKCLVAEGWSPVFATKQIQDALQRAALDSNSQVNAIFQVLQTRELPPTYFRTNKFTSSFQGIIDSYGVAKYQEANPTVYTVVTFPFLFAVMFGDWGHGICLLLAALYFIIREKKLSSQKLDDITEMTFGGRYVILLMAIFSIYTGFIYNEFFSVPFAIFAPSAYECRDLSCRDATTVGLIKVRDTYPFGVDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIVMSYFNAIFFRNSVNVWFQFIPQMIFLNSLFGYLSLLIIVKWATGSQADLYHILIYMFLSPTDDLGENQLFAGQKNLQLVLLLLAVISVPWMLLPKPFILKKQHEARHGVESYEPLQSTDESLQVESNHDSHGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLMMAWGYNNVIILIVGLIVFIFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFHPFSFSWLDDEE* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0324 818 Coils Coil 101 128 - -
Gso12g0324 818 PANTHER VACUOLAR PROTON ATPASES 5 818 IPR002490 GO:0033179|GO:0046961|GO:1902600
Gso12g0324 818 PIRSF ATP6V0A1 11 818 IPR026028 GO:0000220|GO:0046961
Gso12g0324 818 Pfam V-type ATPase 116kDa subunit family 39 811 IPR002490 GO:0033179|GO:0046961|GO:1902600
Gso12g0324 818 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 5 818 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0324 Gso-Chr12 2896315 2907194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0324 13 818 Primary Pumps ATPases(2) AT4G39080 78.713 0.0 1316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0324 K02154 - gmx:100810062 1585.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0324 12 2896315 2907194 Gso11g0972 11 8704068 8714312 GST