Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0299 ATGTCGGCGTCGACGGGAAGCAGCAAAATCCGGCGCATAGTTCGGGTGAGGCAAATGCTTCTCCGGTGGCGGAGGAAGGCAGCGGCGGACGTTCCGGCTGGACACGTGGCGGTGTGCGTGGGGCCCAGCAGGAGGAGGTTCATCGTTCGCGCCACGCATCTGAACCACCCGATTTTCAAGATGCTTCTTGTGAAGGCCGAAGAGGAATACGGTTTCTGCAACCACGGTCCTCTCGCTATACCCTGCGACGAGTCACTCTTCGAAGAGCTTCTTCGGGTCGTGTCCCGACCCGTACCCGGATTCTCCACGCTCGAGGATTTCCAGAGACGCTGCCACATGGATGTTTCCACTGGCTTTGACGTCGTAGGAGAATCGTGGCCGTTGCTTCGTGACGAGCCAATTTGCTGA 408 0.5882 MSASTGSSKIRRIVRVRQMLLRWRRKAAADVPAGHVAVCVGPSRRRFIVRATHLNHPIFKMLLVKAEEEYGFCNHGPLAIPCDESLFEELLRVVSRPVPGFSTLEDFQRRCHMDVSTGFDVVGESWPLLRDEPIC* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0299 135 Pfam Auxin responsive protein 15 93 IPR003676 GO:0009733
Gso12g0299 135 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 131 IPR003676 GO:0009733
Gso12g0299 135 PANTHER SMALL AUXIN-UP RNA-RELATED 5 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0299 Gso-Chr12 2646554 2647362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0299 7 129 Calmodulin-binding Proteins AT4G34750 50.355 7.89e-41 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0299 K14488 - gmx:100795345 274.633