Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0294 ATGGGTTTCCTCATACCAGGTATTATTAGACAGGCATCATTTTCTGCTTCCAAAGCAACTCTCAAGGGAGTTGAAGTCCCAAAAGGCTATCTTGCAGTGTATGTTGGAGATAAGATGAGGCGGTTTGTGATTCCAGTATCATACTTGAACCAACCTTCATTTCAACAATTACTAAATCAAGCTGAAGAAGAGTTTGGATTTGATCACCCAATGGGTGGTCTCACAATTCCATGCAAGGAGGATGAGTTTCTAAACCTTACTTCTCGCTTGAATGAGCTGTAA 282 0.4078 MGFLIPGIIRQASFSASKATLKGVEVPKGYLAVYVGDKMRRFVIPVSYLNQPSFQQLLNQAEEEFGFDHPMGGLTIPCKEDEFLNLTSRLNEL* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0294 93 PANTHER AUXIN-INDUCED PROTEIN 10A5 1 92 - -
Gso12g0294 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 92 IPR003676 GO:0009733
Gso12g0294 93 Pfam Auxin responsive protein 16 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0294 Gso-Chr12 2608269 2609108 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0294 25 83 Calmodulin-binding Proteins AT3G43120 59.322 4.08e-20 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0294 K14488 - gmx:112998525 186.037