Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0291 ATGGGTTTCCGTTTACCTTCTATTCGCAGGGCCTCATTCAAGGCTAGCCAAGCAGCTTCAAAATCTGCAGAAGTCCCAAAGGGCTATCTTGCAGTATATGTTGGAGAGAAACAGAAGCGATTTGTGATTCCCGTATCATACCTGAACCAACCTTCATTCCAAAATTTATTGAGTCAAGCTGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACAATTCTTTGCAGTGAAGATATCTTCCAACATATAACTGCTCACTTGAATGGACAATAA 279 0.4229 MGFRLPSIRRASFKASQAASKSAEVPKGYLAVYVGEKQKRFVIPVSYLNQPSFQNLLSQAEEEFGYDHPMGGLTILCSEDIFQHITAHLNGQ* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0291 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 8 90 IPR003676 GO:0009733
Gso12g0291 92 Pfam Auxin responsive protein 10 87 IPR003676 GO:0009733
Gso12g0291 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 8 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0291 Gso-Chr12 2596055 2596538 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0291 15 85 Calmodulin-binding Proteins AT3G43120 46.479 4.08e-18 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0291 K14488 - gmx:106795238 174.481