Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0290 ATGGGCTTCCGCTTACCTGGTATTAGAAGGTCATCTTTTGCTGTAACCAAAGCAGCTTCCAAGGCTGTGGAGGTCCCCAAAGGCTACCTTGCAGTCTATGTTGGGGAGAAAATGAAGCGGTTTGTGATTCCTATTTCATACTTGAATCAACCTTTATTTCAACAATTACTGAGCCAAGCTGAGGAAGAATTCGGATATGATCATCCAATGGGTGGTCTCACAATTCCTTGCAGCGAAGATGCTTTCCTAGACCTCACTTCTCGTTTGAATGGACTATAA 279 0.4373 MGFRLPGIRRSSFAVTKAASKAVEVPKGYLAVYVGEKMKRFVIPISYLNQPLFQQLLSQAEEEFGYDHPMGGLTIPCSEDAFLDLTSRLNGL* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0290 92 Pfam Auxin responsive protein 15 88 IPR003676 GO:0009733
Gso12g0290 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Gso12g0290 92 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0290 Gso-Chr12 2589769 2590450 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0290 24 82 Calmodulin-binding Proteins AT3G43120 57.627 3.49e-20 77.8