Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0287 ATGATGGGTATTCGTTTGCCGTTTATGGTTCATGCAGCAAAACAGACATCATCGTCATTCAAGTCCAATGTTCCAAAGGGGCACGTGGCAGTTTACGTTGGAGAGATGCAAAAAAAGAGGTTTGTGGTTCCAATATCGTATTTGAACCACCCTTTGTTTCTTGATTTGCTAAACCGCGCCGAAGAAGAGTTTGGCTTCAATCATCCCATGGGGGGACTCACAATTCCTTGCAAAGAAGATGCCTTCATCAATCTAACCTCTCAACTGCGAGCCTTGTGA 279 0.4444 MMGIRLPFMVHAAKQTSSSFKSNVPKGHVAVYVGEMQKKRFVVPISYLNHPLFLDLLNRAEEEFGFNHPMGGLTIPCKEDAFINLTSQLRAL* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0287 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 17 91 IPR003676 GO:0009733
Gso12g0287 92 Pfam Auxin responsive protein 15 87 IPR003676 GO:0009733
Gso12g0287 92 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR21-LIKE 17 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0287 Gso-Chr12 2567571 2568229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0287 23 82 Calmodulin-binding Proteins AT3G43120 53.333 6.32e-17 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0287 K14488 - gmx:100803474 187.963