Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0269 ATGGGCAAACAAGTATTGAATTCCTTTCGTCCCCCAGTGGTTTTCTTGTTATTCTTCATTGTCTTTTCCGTTGTTTCCTGTGATGAAGCTTCCAAGACCTTCATCTTTCGCGTGGATTCCCAATCCAAGCCCACCGTCTTCCCCACCCATTATCACTGGTACACCTCCGAGTTCGCCCAAGAAACCAGCATCCTCCACGTATACGACACCGTTTTCCACGGCTTCTCCGCGGTGCTCACGCACCAACAAGTCGCGTCCATAAGCCAGCACCCCTCCGTCCTCGCCGTCTTCGAAGACCGCCGCCGCCAGCTCCACACCACGCGCTCCCCGCAGTTCCTCGGCCTCCGCAACCAGCGCGGCCTATGGTCCGAATCCGACTACGGCTCCGACGTCATCATTGGAGTCTTCGACACGGGCGTCTGGCCCGAACGCCGCAGCTTCTCCGATTTGAACCTCGGCCCCATTCCCCGCCGCTGGAAAGGCGCGTGCGAAACCGGCGTCAGATTCTCCCCCAAAAACTGCAACCGCAAGCTCATCGGCGCCAGATTCTTCTCCAAAGGCCACGAGGCAGGTGCGGGTTCGGGTCCTCTCAATCCGATCAACGACACCGTCGAATTCCGATCCCCTCGCGACGCCGATGGCCACGGCACCCATACCGCCTCCACCGCCGCCGGCCGCTACGCCTTCCAAGCCAGCATGTCCGGTTACGCTGCTGGAATCGCGAAAGGCGTTGCTCCGAAAGCCAGATTGGCTGCTTACAAAGTTTGCTGGAAAAATTCCGGTTGCTTCGACTCTGACATCCTCGCCGCCTTTGACGCCGCCGTGAACGACGGGGTGGATGTGATTTCGATCTCCATCGGTGGCGGCGACGGTATTGCCTCCCCATATTATCTGGACCCCATCGCAATCGGATCCTACGGCGCAGTTTCCAGAGGAGTGTTCGTGTCCTCTTCCGCCGGCAACGATGGTCCCAGCGGAATGTCAGTGACGAACCTTGCTCCATGGTTAACAACAGTAGGCGCAGGCACCATTGATCGTGACTTCCCCTCACAGGTGATTCTGGGCGACGGTCGGAGACTCTCCGGCGTGTCGCTATACGCCGGAGCAGCTTTGAAGGGGAAAATGTATCAACTTGTTTACCCAGGGAAATCAGGGATTCTTGGAGACTCACTCTGCATGGAGAATTCTCTAGATCCGAACATGGTGAAGGGTAAGATAGTAATATGCGACAGAGGAAGTAGCCCGAGGGTAGCAAAGGGGTTAGTGGTGAAGAAAGCAGGGGGAGTGGGAATGATTCTGGCCAACGGAATATCCAACGGCGAAGGACTGGTGGGAGACGCTCATCTTCTCCCAGCTTGTGCTGTTGGTGCCAACGAAGGAGACGTAATCAAGAAATACATTTCCTCTTCAACAAACCCCACAGCCACTCTTGATTTCAAAGGTACTATCTTAGGAATCAAACCGGCACCGGTTATAGCTTCTTTCTCAGCGAGAGGACCCAACGGTTTAAACCCTCAGATACTTAAACCGGATTTCATTGCTCCCGGTGTCAACATCCTCGCCGCCTGGACCCAAGCTGTCGGCCCGACCGGTTTGGACTCCGATACCAGGAGAACCGAGTTCAACATCTTGTCTGGCACTTCCATGGCTTGCCCTCACGTCAGTGGCGCCGCGGCTTTGCTCAAATCGGCTCACCCTGATTGGAGCCCCGCCGCCCTAAGGTCCGCCATGATGACCACCGCCACCGTCCTCGACAACCGCAACCAGATCATGACCGACGAAGCCACCGGGAACAGCTCAACTCCTTACGATTTCGGTGCTGGCCATCTTAACCTAGGACGAGCCATGGATCCTGGCTTGGTGTACGATATCACCAACAATGATTATGTTAATTTCCTTTGCGGTATTGGTTACGGGCCTAAGGTGATTCAGGTGATCACTCGCGCGCCGGCGAGTTGTCCGGTGAGGAGGCCGGCGCCGGAGAATCTGAATTACCCTTCCTTTGTTGCTATGTTTCCTGCTTCGTCCAAGGGGGTGGCTTCCAAGACGTTCATACGGACTGTGACAAACGTGGGGCCCGCGAACTCAGTTTACCGCGTGAGCGTGGAGGCACCCGCGAGTGGTGTCAGCGTGACGGTGAAGCCGTCGAGGCTCGTGTTCTCGGAGGCGGTGAAGAAGCGGAGCTATGTGGTGACGGTGGCGGGGGACACCCGGAAGCTGAAGATGGGTCCGTCCGGGGCGGTGTTCGGGTCGCTGACGTGGACGGATGGGAAGCACGTGGTTCGGAGCCCCATTGTGGTGACTCAAATAGAACCGTTATAG 2322 0.568 MGKQVLNSFRPPVVFLLFFIVFSVVSCDEASKTFIFRVDSQSKPTVFPTHYHWYTSEFAQETSILHVYDTVFHGFSAVLTHQQVASISQHPSVLAVFEDRRRQLHTTRSPQFLGLRNQRGLWSESDYGSDVIIGVFDTGVWPERRSFSDLNLGPIPRRWKGACETGVRFSPKNCNRKLIGARFFSKGHEAGAGSGPLNPINDTVEFRSPRDADGHGTHTASTAAGRYAFQASMSGYAAGIAKGVAPKARLAAYKVCWKNSGCFDSDILAAFDAAVNDGVDVISISIGGGDGIASPYYLDPIAIGSYGAVSRGVFVSSSAGNDGPSGMSVTNLAPWLTTVGAGTIDRDFPSQVILGDGRRLSGVSLYAGAALKGKMYQLVYPGKSGILGDSLCMENSLDPNMVKGKIVICDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACAVGANEGDVIKKYISSSTNPTATLDFKGTILGIKPAPVIASFSARGPNGLNPQILKPDFIAPGVNILAAWTQAVGPTGLDSDTRRTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAALRSAMMTTATVLDNRNQIMTDEATGNSSTPYDFGAGHLNLGRAMDPGLVYDITNNDYVNFLCGIGYGPKVIQVITRAPASCPVRRPAPENLNYPSFVAMFPASSKGVASKTFIRTVTNVGPANSVYRVSVEAPASGVSVTVKPSRLVFSEAVKKRSYVVTVAGDTRKLKMGPSGAVFGSLTWTDGKHVVRSPIVVTQIEPL* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0269 773 CDD PA_subtilisin_like 352 477 - -
Gso12g0269 773 PANTHER - 23 768 - -
Gso12g0269 773 SUPERFAMILY Subtilisin-like 104 620 IPR036852 GO:0004252|GO:0006508
Gso12g0269 773 Pfam Subtilase family 128 596 IPR000209 GO:0006508|GO:0008236
Gso12g0269 773 Gene3D - 345 484 - -
Gso12g0269 773 Gene3D Peptidase S8/S53 domain 130 629 IPR036852 GO:0004252|GO:0006508
Gso12g0269 773 PRINTS Subtilisin serine protease family (S8) signature 128 147 IPR015500 -
Gso12g0269 773 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Gso12g0269 773 PRINTS Subtilisin serine protease family (S8) signature 545 561 IPR015500 -
Gso12g0269 773 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 23 768 IPR045051 -
Gso12g0269 773 Gene3D - 633 770 - -
Gso12g0269 773 CDD Peptidases_S8_3 103 582 IPR034197 -
Gso12g0269 773 Pfam Fibronectin type-III domain 662 767 IPR041469 -
Gso12g0269 773 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Gso12g0269 773 ProSiteProfiles Serine proteases, subtilase domain profile. 103 616 - -
Gso12g0269 773 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 105 IPR037045 -
Gso12g0269 773 Pfam PA domain 377 461 IPR003137 -
Gso12g0269 773 SUPERFAMILY PA domain 399 470 IPR046450 -
Gso12g0269 773 Pfam Peptidase inhibitor I9 47 105 IPR010259 -
Gso12g0269 773 ProSitePatterns Serine proteases, subtilase family, serine active site. 546 556 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0269 Gso-Chr12 2407674 2410463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0269 14 773 Subtilisin-like Serine Gene Family AT4G34980 74.869 0.0 1197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0269 - - gmx:100817537 1509.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0269 12 2407674 2410463 Gso11g0910 11 8180150 8182884 GST