Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0265 ATGTGGATTAAAGCGATGGGCAGCACTAGCAGCTATGTTTCAAGCAGCAGCAGCAGCAAATGGCTGGGCTTCGTGGCGGCCGTGTGGATTCAATGCATCTCCGGCAACAACTACACTTTCTCAAACTACTCCGACGCCCTCAAATCCCTCATGCACCTCACTCAGCTCCAACTCAACAACCTCTCCGTCGCTAAAGACGTTGGCAAAGCCTTTGGGCTTCTGGCGGGCCTCGCCTCCGACCGCTTCCCCACTTGGGCTATTCTCCTCATTGGCTCCGTCGAAGGCCTTATTGGCTACGGAGCCCAATGGCTCGTTGTTAGCCAGAGAATTCAGCCCCTCCCTTACTGGCAGCTGTGCGTGTTTCTCTGCATGGGAGGCAACAGCACCACTTGGATGAACACTGCCGTTTTGGTAACATGCATTCGGAACTTCCGTTCAAACAGAGGACCCGTTTCGGGGATTCTGAAAGGCTTTGTAGGCTTGAGCACTGCGATATTCACTACTCTCTGTTCCGCGCTCTTCGCCGACGACCCTGGCTCCTTCCTCATCATGCTCTCTGTCATTCCCTTCGCAGTTTGCCTCACCGGTGTGTTTTTCCTCCGGGAGACTCCCCCCGACGTCTCCGCCGGTGATGACGACGGCGAAGAGGTAAAGTACTTCGGCTTCTTCAACGTGGTGGCGGTGGCGGTGGCGCTTTTTCTGTTGGCGTATGGGTTCATCCCCAGCCCTAGCATGTTGGTGTCAAGATTGTTTGTGGCGGTTTTGGTGGTGATGCTGGCTTCGCCGTTGGGGATCCCGGTGTACTCGTACTTGAAGGGACGGCTCGGAGGGGGAAATGACGTGGAGAGGCAGAGGCTGAAGGAGCCGTTGCTTCAGATTCCGGAGAAGGAGAATGAAGGCGTGGTGGCGGAGGAAGAGGCGGAGATAGTGAAGAGGGCGCCGGAGGTGGGTGAGGAGCACACGATAGTGGAGGCGCTGAGAAGCGTAGATTTTTGGATCTTGTTCGTGTCGTTTTTGTGTGGGGTTGGGACGGGTTTGGCAGTGATGAACAATATGGGTCAAATCGGGTTGGCGCTCGGATACCCAGATGTCTCGCTCTTTCTGTCTTTGACAAGTATTTTCGGGTTTTTCGGACGGATAATCTCGGGTACCGTTTCGGAGTTCACCATCAAGAAAGCTGCAACACCTAGGCCTCTTTGGAATGCAGCATCTCAGCTTCTAATGGCGGTAGGTTACATACTCCTGGCCATGGCTATGCCAGGTTCCCTATACATTGGGTCTATTTTAGTTGGCATGTGTTATGGAGTGAGGCTTGCCATTACAGTCCCAACAGCCTCAGAGTTATTTGGACTCAAATATTATGGTCTCATCTATAACATTCTCATCCTTAACCTTCCTCTCGGTTCTTTCCTTTTCTCTGGTCTGCTTGCTGGCATACTCTATGATATGGAGGCAACTACAACAGAGGGAGGAGGCAACACATGTGTTGGAGGTCATTGTTACAGGCTAGTCTTTATTGTCATGACTGGAGCATGCATTGTTGGATTCTTCTTAGACATTCTGTTGTCAATCAGAACCAAGAATATTTACACCAAGATTTCCACGAGCAAGAAGCCCAAGAAATCCTTAGGAACATCAAATAGGCAGTGA 1650 0.5176 MWIKAMGSTSSYVSSSSSSKWLGFVAAVWIQCISGNNYTFSNYSDALKSLMHLTQLQLNNLSVAKDVGKAFGLLAGLASDRFPTWAILLIGSVEGLIGYGAQWLVVSQRIQPLPYWQLCVFLCMGGNSTTWMNTAVLVTCIRNFRSNRGPVSGILKGFVGLSTAIFTTLCSALFADDPGSFLIMLSVIPFAVCLTGVFFLRETPPDVSAGDDDGEEVKYFGFFNVVAVAVALFLLAYGFIPSPSMLVSRLFVAVLVVMLASPLGIPVYSYLKGRLGGGNDVERQRLKEPLLQIPEKENEGVVAEEEAEIVKRAPEVGEEHTIVEALRSVDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYPDVSLFLSLTSIFGFFGRIISGTVSEFTIKKAATPRPLWNAASQLLMAVGYILLAMAMPGSLYIGSILVGMCYGVRLAITVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYDMEATTTEGGGNTCVGGHCYRLVFIVMTGACIVGFFLDILLSIRTKNIYTKISTSKKPKKSLGTSNRQ* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0265 549 Pfam Nodulin-like 20 267 IPR010658 -
Gso12g0265 549 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 539 - -
Gso12g0265 549 Gene3D MFS general substrate transporter like domains 289 543 IPR036259 -
Gso12g0265 549 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 14 539 - -
Gso12g0265 549 Gene3D MFS general substrate transporter like domains 16 211 IPR036259 -
Gso12g0265 549 CDD MFS_Mch1p_like 20 515 - -
Gso12g0265 549 SUPERFAMILY MFS general substrate transporter 21 528 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0265 Gso-Chr12 2357181 2361033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0265 20 545 Nodulin-like Gene Family AT4G34950 67.446 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0265 - - gmx:100807372 998.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0265 12 2357181 2361033 Gso11g0905 11 8129698 8133413 GST