Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0256 ATGGCGGCTACTGTGTCTTCTGCTTGGTCAAAGCCCGGCGCGTGGGCCCTAGATTCCGAGGAACACGAAGCCGAGCTCCTTCAACAGAACAACAACAACCCCAACGACAAGCCACTCGCCGACTTCCCCTCCCTTGCCGCCGCCGCCGCCACCAAGCCCAAGAAGAAGAAGGCCCAGACCTACTCCCTCGCCGAATTCACCGCCAAGCCCGACTCCGCCTTCGCCGACCAAGATCCCGTCGTCCTCCCCACCGGCCCCCGCCAGCGCACCGCCGAGGAGCTCGACCGCACCCGTCTCGGTGGCGGCTTCCGCAACTATGGCGACCGCCCCAACAGGAATAACTCCTCCGGCGGCGACGAGTCTTCCAATTCCCGCTGGGGTTCATCTAGGGTTTCTGACGAGCCCAGGAGAAACGGTTTTGGGGCTAGGGATTCCAATCGCGAGCTTCCCCCTTCGCGCGCTGACGAAACTGATAATTGGGCCGCCGCGAAGAAACCCTCCGGGGGGTTTGAAAGGAGGGAGAGGGACAAAGGAGGGTTTTTCGATTCGCAGTCGCGCGCTGATGAATCTGACAGCTGGGTTTCGAATAAGAGTTTCGTGCCTTCTGAAGGGCGGAGATTCGGTTCCAACGGCGGCGGGTTCGAGCGAGAGAGGAGGGTTGTTGGGTTCGGCTCCAGCGGCGGCGCGGATTCCGACAATTGGAACACAAAGAAGGGCGAGTCCAACGTTGGTAGCGAGAGTGTTGGTGGGAGGCCGAAGCTTGTGTTGCAACCTCGGACAGTGTCCGTGAGCGATGAAGGGGCTGATGGCAATAATGCGGGGAAGCCTAAAGGTGTTAATCCGTTCGGAGAGGCGAGGCCGAGGGAGCAGGTTTTGGCGGAGAAAGGGCAGGATTGGAAGAAGATTGATGAGCAGCTTGAGAGCGTCAAGATTAAGGAGGCAAGTGGTGGTGATGGGTTTGGAAAGAGGGGTTTTGGCTCTTCCAACGGTGGTGGAGGACGTGCTACTTTGCCTGAAAGTCGCACTGAGAGGAGTTGGAGGAAGCCCCAATTTGATGATGATCGTCCTAAAAGTGCTGAGAAAGTGGAAGATGAACCTGATCAAAAAAAGGAAGTGGAAGATGAACACGTTGAAAAAAATTGA 1143 0.5766 MAATVSSAWSKPGAWALDSEEHEAELLQQNNNNPNDKPLADFPSLAAAAATKPKKKKAQTYSLAEFTAKPDSAFADQDPVVLPTGPRQRTAEELDRTRLGGGFRNYGDRPNRNNSSGGDESSNSRWGSSRVSDEPRRNGFGARDSNRELPPSRADETDNWAAAKKPSGGFERRERDKGGFFDSQSRADESDSWVSNKSFVPSEGRRFGSNGGGFERERRVVGFGSSGGADSDNWNTKKGESNVGSESVGGRPKLVLQPRTVSVSDEGADGNNAGKPKGVNPFGEARPREQVLAEKGQDWKKIDEQLESVKIKEASGGDGFGKRGFGSSNGGGGRATLPESRTERSWRKPQFDDDRPKSAEKVEDEPDQKKEVEDEHVEKN* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0256 380 MobiDBLite consensus disorder prediction 288 311 - -
Gso12g0256 380 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 1 362 - -
Gso12g0256 380 MobiDBLite consensus disorder prediction 340 380 - -
Gso12g0256 380 MobiDBLite consensus disorder prediction 108 129 - -
Gso12g0256 380 MobiDBLite consensus disorder prediction 130 160 - -
Gso12g0256 380 MobiDBLite consensus disorder prediction 167 184 - -
Gso12g0256 380 MobiDBLite consensus disorder prediction 185 203 - -
Gso12g0256 380 MobiDBLite consensus disorder prediction 228 243 - -
Gso12g0256 380 MobiDBLite consensus disorder prediction 1 380 - -
Gso12g0256 380 Pfam Plant specific eukaryotic initiation factor 4B 6 310 IPR010433 GO:0003743
Gso12g0256 380 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 362 IPR010433 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0256 Gso-Chr12 2273052 2275445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0256 1 348 Eukaryotic Initiation Factors Gene Family AT4G38710 51.263 1.94e-65 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0256 - - gmx:100820014 707.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0256 12 2273052 2275445 Gso11g0897 11 8047715 8050155 GST