Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso12g0253 | ATGGAGAGATCCTATGATGTCTTTGTTTTTCTCCTTGTCTCGGTTCTTTGTCTCTTCCTGTCCCAACCAGCAAGATCACAAGATGATTCACAACCGCTTCTGGCATTGAAATCCTCCATAGACGTTCTCAACAAGCTTCCATGGCGAGAAGGAACCGACGTGTGCACGTGGTTAGGGGTCAGAGACTGCTTCAACGGAAAAGTGAGGAAGCTAGTTCTGGAACACTCCAACTTAACCGGTTCTCTGGATTCCAAGATCTTGAACCGTTTGGACCAGCTCCGAGTCCTCAGTTTCAAAGGAAACTCGCTCTCCGGGCAAATACCCAACATCTCCGCCTTGGTCAACCTCAAATCGATTTTCCTCAACGAAAACAACTTCTCCGGCGATTTTCCCGCCTCCGTCGCCCTCCTCCACCGCGTGAAAGTCATTGTACTGTCGCAAAACCATATCTCCGGCGAAATTCCGGCGTCGCTGCTGAATCTCCGGCGACTGTACGTTCTCTACTTGCAAGACAACGCGTTGACTGGACGCATTCCCGGTTTCAACCAGAGCAGCCTCAGGTATTTAAACGTTTCGAAAAACCGTCTATCCGGCGAGATTCCGGTGACGTCGGCATTGATCCGGTTCAATGAGTCGTCGTTTTGGGGGAACCCGGGGCTCTGCGGGGAACAGATCGAAGAAGCATGCAAAAACGGAAGCGGTTCAATGCCGCCATCGATAAGCCCTAGCTATCCGTTGAAACCGGGAGGAACAACGTCAACGACGATGGGGAAATCGAAGCGCACGAAATTGATAAAGATAATTGGAGGGAGCGTTGGGGGAGTTGTTTTTGCATTAGGATGCGTGGTTTTGGTGTGGGTGATTTGCAGGAAGTGGAAAAGAAGGAGGAGGAGGAGGAGGAGGAGGAAGGGTGGTGCTGAAGTGGCAGAAGGGGAAGTGGGTGCGGCGGGAAGTGGGGGAGGAGGTGATAATAGTAAAGAAGAAGAAGGTGGGGGGTTTGCGTGGGAAAGTGAGGGTATAGGGAAGCTGGTGTTCTGCGGAGGAGGGGATGGGGACATGAGTTATAGTTTGGAGGATTTGCTCAAGGCTTCGGCGGAGACACTGGGGAGGGGTATAATGGGAAGTACGTATAAGGCAGTGATGGAATCGGGGTTCATAGTTACTGTGAAGAGGTTGAAAGATGCAAGGTACCCTGGCTTGGAAGAGTTCAGTGCTCACATTCAAGTCCTTGGGAGGCTCACCCACCCTAACCTCGTCCCTCTCAGGGCTTATTTCCAGGCTAAGGAGGAACGCCTCCTCGTTTATGATTACTTTCCTAATGGCAGCCTCTTCTCCCTTATTCACGGATCGAAAACATCTGGTGGGGGAAAGCCTCTTCACTGGACATCCTGCCTTAAAATTGCTGAGGATCTAGCAACAGGCATGCTCTATATCCACCAGAACCCTGGCTTGACACATGGAAACCTGAAATCTTCTAATGTATTGTTGGGTTCTGACTTTGAGTCATGTCTTACTGATTATGGTCTCACTGTGTTCCTTAATCCTGACACAATGGATGAGCCTAGTGCAACTTCTTTGTTCTATAGAGCACCTGAATGCCGCAACTTTCAAAGGTCACAAACTCAACCAGCTGATGTATACAGTTTCGGGGTCCTTCTTCTTGAGCTTTTAACTGGCAAAACACCCTTCCAAGACCTTGTTCAGACATATGGTTCAGACATACCTAGGTGGGTTCGGTCAGTGCGCGAAGAGGAGACGGAGTCTGGGGATGATCCTGCTTCAGGCAATGAAGCATCTGAAGAGAAGCTTCAGGCTCTTTTGAACATTGCAATGGCATGTGTTTCACTAGTGCCGGAGAACAGGCCTACAATGAGAGAAGTTTTAAAGATGATAAGAGATGCAAGAGGGGAGGCTCATGTCTCATCTAACAGTAGTGATCACTCCCCTGGTAGATGGTCAGATACTGTTCAAAGCTTTCCAAGGGAAGAACACCAGAGCATATGA | 2004 | 0.495 | MERSYDVFVFLLVSVLCLFLSQPARSQDDSQPLLALKSSIDVLNKLPWREGTDVCTWLGVRDCFNGKVRKLVLEHSNLTGSLDSKILNRLDQLRVLSFKGNSLSGQIPNISALVNLKSIFLNENNFSGDFPASVALLHRVKVIVLSQNHISGEIPASLLNLRRLYVLYLQDNALTGRIPGFNQSSLRYLNVSKNRLSGEIPVTSALIRFNESSFWGNPGLCGEQIEEACKNGSGSMPPSISPSYPLKPGGTTSTTMGKSKRTKLIKIIGGSVGGVVFALGCVVLVWVICRKWKRRRRRRRRRKGGAEVAEGEVGAAGSGGGGDNSKEEEGGGFAWESEGIGKLVFCGGGDGDMSYSLEDLLKASAETLGRGIMGSTYKAVMESGFIVTVKRLKDARYPGLEEFSAHIQVLGRLTHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSGGGKPLHWTSCLKIAEDLATGMLYIHQNPGLTHGNLKSSNVLLGSDFESCLTDYGLTVFLNPDTMDEPSATSLFYRAPECRNFQRSQTQPADVYSFGVLLLELLTGKTPFQDLVQTYGSDIPRWVRSVREEETESGDDPASGNEASEEKLQALLNIAMACVSLVPENRPTMREVLKMIRDARGEAHVSSNSSDHSPGRWSDTVQSFPREEHQSI* | 668 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso12g0253 | 667 | Gene3D | Ribonuclease Inhibitor | 183 | 232 | IPR032675 | - | |
Gso12g0253 | 667 | ProSiteProfiles | Protein kinase domain profile. | 362 | 640 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso12g0253 | 667 | Gene3D | Ribonuclease Inhibitor | 26 | 182 | IPR032675 | - | |
Gso12g0253 | 667 | MobiDBLite | consensus disorder prediction | 299 | 331 | - | - | |
Gso12g0253 | 667 | SUPERFAMILY | L domain-like | 33 | 222 | - | - | |
Gso12g0253 | 667 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 28 | 655 | - | - | |
Gso12g0253 | 667 | SUPERFAMILY | Protein kinase-like (PK-like) | 366 | 642 | IPR011009 | - | |
Gso12g0253 | 667 | MobiDBLite | consensus disorder prediction | 638 | 667 | - | - | |
Gso12g0253 | 667 | Pfam | Protein kinase domain | 365 | 629 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso12g0253 | 667 | MobiDBLite | consensus disorder prediction | 234 | 257 | - | - | |
Gso12g0253 | 667 | PANTHER | INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE | 28 | 655 | - | - | |
Gso12g0253 | 667 | MobiDBLite | consensus disorder prediction | 231 | 257 | - | - | |
Gso12g0253 | 667 | MobiDBLite | consensus disorder prediction | 641 | 667 | - | - | |
Gso12g0253 | 667 | Gene3D | Transferase(Phosphotransferase) domain 1 | 438 | 654 | - | - | |
Gso12g0253 | 667 | Gene3D | Phosphorylase Kinase; domain 1 | 350 | 437 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso12g0253 | Gso-Chr12 | 2254297 | 2260240 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso12g0253 | 15 | 667 | Receptor kinase-like Gene Family | AT1G60630 | 61.991 | 0.0 | 778 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Gso12g0253 | Pkinase | 2.1e-35 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso12g0253 | - | - | gmx:100809866 | 1218.37 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso12g0253 | 12 | 2254297 | 2260240 | Gso11g0894 | 11 | 8011144 | 8016344 | GST |