LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso12g0221	ATGCTGCTCACTTTCTGGACCCTGCTTTTTTCCTTCCTCCTAACCACTGCCTCCGCCGCTGCCGGAAGGGAATATTCCGGCGAAGAGGCGCCACAGCAGGAGGCTGACAGAGTGAAGAACTTGCCAGGACAACCGCCGGTGAAATTCAGACACTACGCTGGTTATGTCAAGCTAAGGCCAAATGAAGAGAAGGCATTGTTCTACTGGTTCTTCGAAGCTCAAGAAGATCCCTCACAAAAGCCTCTTGTACTTTGGCTTAACGGAGGACCTGGTTGCTCGTCCATTGCCTTTGGAGCAGCACGAGAGATTGGTCCATTTCTTGTCCAAGACAAAGAACGCGTCAAACTTAACAAATTCTCTTGGAACAGAGTTGCAAACATCATATTCTTGGAGGCACCGATTGGTGTCGGGTTTTCTTACACTAACAATTCCAAAGATTTACATGAACTTGGGGATCGAGTTTCTGCCATTGATAACTATGCCTTCTTGATTGGTTGGTTCAAAAGGTTCCCTAACTTCAGATCCCACGACTTTTATATTACAGGAGAGAGCTATGCAGGGCATTATGTTCCACAGCTCGCCGACCTTATCTATGAAGGAAACAAAGATACCAAAAAAGGCTCTTACATAAATATCAAGGGATTCATGGTGGGAAATGCTGTGATTAATGATATTACAGATATAGTGGGTTTGGTTGATTATGCTTGGAGCCACGCCATCATCTCAAACCAAGTATTTGCTGGGTTAACGAGAGATTGTAATTTTAGTATAGAGAACCAAACAAGGAGTTGCGATTTGCAAATTGCTAAGTTACTGGGAGCTTACAGCGATATTGACATATACAGCATTTACTCGCCCATTTGCCTCTATGACTACCAAAGACCACTTTCAGCCAAACTTGTCGTTGCTCCCCATCTTCTTACACGTCATGACCTGTGGCGTACACTACCATCAGGATACGATCCCTGTGCAGAAGATCTTGTAGGCAAATATTTCAATAATAAGGATGTTCAGAAGGCCCTCCATGCAAACATCACCAACTTGTCGTACCCCTATAGCCTTTGCAGTTCGGTAATTGAGAAATGGAATGACTCGCCAAAGACAATTCTGCCAGTTATTCAGAAGCTCCTACGTGCCGGTTTACGCATTTGGATATACAGTGGGGATGCGGATGGTCGAGTTCCAGTGACATCAACAAGATACAGCATAGAGAAGATGAGACTGAAAGTAAAGAAAGAGTGGAGAGCTTGGTTTGTGAAGAGTCAAGTGGCAGGGTGGACGGAGGAGTACGAGGGTGGCCTCACCTTTGCTACCATTAGAGGTGCTGGCCACCAGGTTCCTGTCTTTGCACCAGAGCAAGCTCTTTCTCTTTTCACACATTTCCTCTCTTCTCAAACCCTCCCATCTTCTCGCTTCTAG	1419	0.4545	MLLTFWTLLFSFLLTTASAAAGREYSGEEAPQQEADRVKNLPGQPPVKFRHYAGYVKLRPNEEKALFYWFFEAQEDPSQKPLVLWLNGGPGCSSIAFGAAREIGPFLVQDKERVKLNKFSWNRVANIIFLEAPIGVGFSYTNNSKDLHELGDRVSAIDNYAFLIGWFKRFPNFRSHDFYITGESYAGHYVPQLADLIYEGNKDTKKGSYINIKGFMVGNAVINDITDIVGLVDYAWSHAIISNQVFAGLTRDCNFSIENQTRSCDLQIAKLLGAYSDIDIYSIYSPICLYDYQRPLSAKLVVAPHLLTRHDLWRTLPSGYDPCAEDLVGKYFNNKDVQKALHANITNLSYPYSLCSSVIEKWNDSPKTILPVIQKLLRAGLRIWIYSGDADGRVPVTSTRYSIEKMRLKVKKEWRAWFVKSQVAGWTEEYEGGLTFATIRGAGHQVPVFAPEQALSLFTHFLSSQTLPSSRF*	473

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso12g0221	472	Gene3D	-	369	463	-	-
	Gso12g0221	472	Gene3D	alpha/beta hydrolase	32	290	IPR029058	-
	Gso12g0221	472	ProSitePatterns	Serine carboxypeptidases, histidine active site.	434	451	IPR033124	GO:0004185
	Gso12g0221	472	Pfam	Serine carboxypeptidase	42	463	IPR001563	GO:0004185\|GO:0006508
	Gso12g0221	472	Gene3D	-	323	360	-	-
	Gso12g0221	472	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	24	465	IPR001563	GO:0004185\|GO:0006508
	Gso12g0221	472	SUPERFAMILY	alpha/beta-Hydrolases	33	469	IPR029058	-
	Gso12g0221	472	ProSitePatterns	Serine carboxypeptidases, serine active site.	180	187	IPR018202	GO:0004185
	Gso12g0221	472	PRINTS	Carboxypeptidase C serine protease (S10) family signature	117	129	IPR001563	GO:0004185\|GO:0006508
	Gso12g0221	472	PRINTS	Carboxypeptidase C serine protease (S10) family signature	130	140	IPR001563	GO:0004185\|GO:0006508
	Gso12g0221	472	PRINTS	Carboxypeptidase C serine protease (S10) family signature	166	191	IPR001563	GO:0004185\|GO:0006508
	Gso12g0221	472	PRINTS	Carboxypeptidase C serine protease (S10) family signature	434	447	IPR001563	GO:0004185\|GO:0006508
	Gso12g0221	472	PANTHER	SERINE CARBOXYPEPTIDASE-LIKE 35	24	465	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso12g0221	Gso-Chr12	1879752	1885336	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso12g0221	328	467	Calmodulin-binding Proteins	AT2G22960	30.496	5.44e-15	71.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso12g0221	K16297		-	gmx:100799746	938.717