LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso12g0205	ATGGATGACCAATTTTCGACCGTTCATAGTCATAGTCGTGAGCCAATGCCTAGGGGCTTAGTTCATGAGAAGTCTTCAGAGCCCAAATTTCTTGCCTACATTGGTGCCCACGAATTTTTCACAATAGAGACGTGGAAAGCAGCTTTGGTAGAGTTAATTGCAACTGCTGCACTAATGTTCACCCTAACGAGTTGCAATATTGCATGTTTGGAGTCACAAGATGTCAATCCAAAGCTTATTCTTCCCTTTGCAGTCTTCATCATAGTATTCTTGTTTCTAATTGTGATAGTTCCTCTATCCGGGGGTCATATGAACCCTATTTTTACATTCATTGCGGCTTTAAAGGGTGTTGTGACCCTTTCTCGTGCTCTCCTTTACGTGTCAGCTCAATGCATTGGCTCAATAATTGGTTTCTTTGTACTCAAGAGTGTGATGGAGCCAAAATTAGCAGACACATATTCTTTGGGAGGTTGTGCCCTTGGTGACAAAGGACAAAGTTCTGGCCTAAGGCCACAAGATGCTTTGTTGTTGGAATTCTCTTGCACATTCTTAGTACTCTTTGTGGGTCTAACGTTGGCATTTGATAAGAAAAGGTGCAAGGAATTGGGCTTGCCAATGGTTTGTTTGGTGGTTGCAGCATCCTTGGCACTGGCAGTGTTTGTGTCCATAACTGTAACTGGCAGGCCTGGCTATGCAGGTGCTGGGCTGAGCCCTGCAAGATGCCTAGGTCCAGCGTTGCTTCATGGAGGCCCACTATGGAATGGGCATTGGGTTTTCTGGCTTGGGCCTTTCTTGGCCTGCATAATCTATTATAGTGTCTCCATTAATCTACCAAAGAAAGGTTTGAATTGGGTTGATGGAGAATATGATGTCTTAAGATTGGCTCTGGGTTCTTGTAGGACTATTTCTAATAATACGGATTTAAATGATCTTTCTTGA	939	0.4345	MDDQFSTVHSHSREPMPRGLVHEKSSEPKFLAYIGAHEFFTIETWKAALVELIATAALMFTLTSCNIACLESQDVNPKLILPFAVFIIVFLFLIVIVPLSGGHMNPIFTFIAALKGVVTLSRALLYVSAQCIGSIIGFFVLKSVMEPKLADTYSLGGCALGDKGQSSGLRPQDALLLEFSCTFLVLFVGLTLAFDKKRCKELGLPMVCLVVAASLALAVFVSITVTGRPGYAGAGLSPARCLGPALLHGGPLWNGHWVFWLGPFLACIIYYSVSINLPKKGLNWVDGEYDVLRLALGSCRTISNNTDLNDLS*	313

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso12g0205	312	Gene3D	Glycerol uptake facilitator protein.	30	277	IPR023271	-
	Gso12g0205	312	PANTHER	AQUAPORIN-LIKE	21	308	-	-
	Gso12g0205	312	MobiDBLite	consensus disorder prediction	1	21	-	-
	Gso12g0205	312	SUPERFAMILY	Aquaporin-like	42	269	IPR023271	-
	Gso12g0205	312	PRINTS	Major intrinsic protein family signature	46	65	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Gso12g0205	312	PRINTS	Major intrinsic protein family signature	85	109	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Gso12g0205	312	PRINTS	Major intrinsic protein family signature	122	141	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Gso12g0205	312	PRINTS	Major intrinsic protein family signature	177	195	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Gso12g0205	312	PRINTS	Major intrinsic protein family signature	218	240	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Gso12g0205	312	PRINTS	Major intrinsic protein family signature	257	277	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Gso12g0205	312	Pfam	Major intrinsic protein	41	268	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Gso12g0205	312	PANTHER	MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER	21	308	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso12g0205	Gso-Chr12	1737214	1738787	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso12g0205	17	269	Major Intrinsic Protein MIP	AT2G37170	25.379	8.32e-22	92.0

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso12g0205	K09866		-	gmx:100797262	593.193

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso12g0205	12	1737214	1738787	Gso11g0832	11	7479913	7482398	GST