Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0192 ATGGGATTTATGTTGCAAGAAGAAGGGTCGTCTTCTGTAAATTCTTCACCCCTGCAGTTCTTCTCCATGATGTCACTTTCACCTAGCTTAGGTTCTCCCAACAATCTCTTGTTTAGAGAAATGAAATCCGAGGAAAGGGGTTTGTACTTGATTCATTTGTTGCTCAGTTGTGCAAATCATGTAGCTGCTGGTAACCTTGAAAATGCAAACACCACACTTGAGCAAATTTCCATGCTTGCTTCCCCTGATGGGGACACTATGCAGCGAATCGCAACATATTTTATGGAGTCGCTTGCTGATCGGATTCTTAAAACATGGCCTGGGATCCACAGAGCCCTCAACTCAACCAGAATGACTTTGATATCCGACGAAATTCTGGTTCAGAAGCTTTTCTTTGAGCTTTTCCCTTTCTTGAAGGTAGCATTTGTTCTCACAAATCAGGCCATCATTGAAGCAATGGAAGGGGAGAAAGTGATTCACATAATTGATCTCAATGCTGCTGAAGCTGCTCAGTGGATTGCTCTCCTTCGAGTATTAAGTGCGCATCCCGAAGGCCCTCCTCATTTGAGAATCACCGGGGTTCATCAGAAAAAGGAGATTCTGGATGAGGTGGCTCATAGACTAACTGAAGAAGCAGAAAAGTTGGATATACCGTTCCAATTCAACCCTGTGGCAAGCAAATTAGAAAATCTTGATTTTGACAAACTTCGGGTGAAAACTGGGGAGGCACTAGCAATAAGTTCCATTCTCCAATTGCATACCCTTTTGGCCTGGGATGATGAAGCCATGCAGAGAAAGTCTCCTCTTCTGTTAAAAAGCTCAAATGGAATTCACCTGCAAAGAGTTCTGCCAATGGGCCAAAGCACATTGGGTGATTTGCTTGAGAAAGATATGGTTAATGGGTACACTCCAAGTCCTGACTCAACCTCATCATCTCCATCATCTTTAACTACTTCCAATTCAATGAATATGGAGAGCTTTCTTAATGCCTTGTGGGGATTATCACCAAAGGTCATGGTTGTGACAGAACAAGACTGTAATCACAATGGTCCAACTCTGATGGATAGGCTTCTTGAAGCTCTATACTCTTATGCAGCATTGTTTGATTGTTTGGAATCCACTGTCTCAAGAACATCATTGGAGAGATTAAGGGTGGAGAAGATGCTTTTTGGGGAGGAAATAAAGAACATCATTGCATGTGAGGGATCTGAACGAAAGGAAAGACATGAAAAGCTGGAAAAGTGGTTCCAGAGATTTGATCTAGCTGGGTTTGGCAACGTGCCTTTGAGCTACTTTGGTATGGTGCAAGCAAGGAGGTTCCTGCAGAGCTATGGTTGTGAAGGATACAGAATGAGGGATGAAAATGGTTGTGTGTTAATTTGCTGGGAGGATCGGCCAATGTATTCAATATCAGCTTGGAGATCTAGGAAGTAA 1434 0.4289 MGFMLQEEGSSSVNSSPLQFFSMMSLSPSLGSPNNLLFREMKSEERGLYLIHLLLSCANHVAAGNLENANTTLEQISMLASPDGDTMQRIATYFMESLADRILKTWPGIHRALNSTRMTLISDEILVQKLFFELFPFLKVAFVLTNQAIIEAMEGEKVIHIIDLNAAEAAQWIALLRVLSAHPEGPPHLRITGVHQKKEILDEVAHRLTEEAEKLDIPFQFNPVASKLENLDFDKLRVKTGEALAISSILQLHTLLAWDDEAMQRKSPLLLKSSNGIHLQRVLPMGQSTLGDLLEKDMVNGYTPSPDSTSSSPSSLTTSNSMNMESFLNALWGLSPKVMVVTEQDCNHNGPTLMDRLLEALYSYAALFDCLESTVSRTSLERLRVEKMLFGEEIKNIIACEGSERKERHEKLEKWFQRFDLAGFGNVPLSYFGMVQARRFLQSYGCEGYRMRDENGCVLICWEDRPMYSISAWRSRK* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0192 477 MobiDBLite consensus disorder prediction 297 319 - -
Gso12g0192 477 Pfam GRAS domain family 50 474 IPR005202 -
Gso12g0192 477 ProSiteProfiles GRAS family profile. 41 474 IPR005202 -
Gso12g0192 477 PANTHER SCARECROW-LIKE PROTEIN 3 5 476 IPR030008 GO:0003700|GO:0005634|GO:0009739
Gso12g0192 477 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 5 476 IPR005202 -
Gso12g0192 477 MobiDBLite consensus disorder prediction 302 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0192 Gso-Chr12 1607051 1609622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0192 1 477 GRAS Transcription Factor Family AT1G50420 64.476 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso12g0192 GRAS 1.7e-135 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0192 - - gmx:100814131 877.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0192 12 1607051 1609622 Gso11g0816 11 7329884 7332365 GST