Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0152 ATGGATGCCCCCAAGGATCATCAAAATGTTGTAACCATAGATGTCCATGCTGCCAAAGATCTGCTCAATTCATCTGGTTATCGTTATCTGGATGTTAGGTCAGTTGAGGAATTCAACAAAAGCCATGTTGAGAATGCTCATAATGTCCCCTATGTCTTCATCACAGAAGCAGGACGGGTGAAAAATCCAGATTTTGTTGACCAGGTGGCAGCAATATGCAAGACTGAGGATCATTTGATTGTGGCTTGCAATAGTGGAGGAAGATCACTCCGAGCCTCCGTTGATCTGCTTGATTCAGGATTTAAGAATATTGTTAACATGGGGGGAGGCTACTCTGCGTGGGTGGATGCTGGATTTGCCGGGAACAAGCCAGGAGAAGACCTCAAAACTAGTTGCAAGTTCCGTCCTAATATCGCAAAACCCACTGCACAACCATAG 438 0.4521 MDAPKDHQNVVTIDVHAAKDLLNSSGYRYLDVRSVEEFNKSHVENAHNVPYVFITEAGRVKNPDFVDQVAAICKTEDHLIVACNSGGRSLRASVDLLDSGFKNIVNMGGGYSAWVDAGFAGNKPGEDLKTSCKFRPNIAKPTAQP* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0152 145 PANTHER PROTEIN HIGH ARSENIC CONTENT 1, MITOCHONDRIAL-RELATED 5 134 - -
Gso12g0152 145 Gene3D - 2 120 IPR036873 -
Gso12g0152 145 PANTHER THIOSULFATE SULFURTRANSFERASE 18 5 134 IPR044684 GO:0003824
Gso12g0152 145 CDD RHOD 18 115 - -
Gso12g0152 145 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 8 119 IPR036873 -
Gso12g0152 145 SMART rhod_4 13 120 IPR001763 -
Gso12g0152 145 ProSiteProfiles Rhodanese domain profile. 23 123 IPR001763 -
Gso12g0152 145 Pfam Rhodanese-like domain 17 116 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0152 Gso-Chr12 1251952 1253490 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0152 8 127 Sulfurtransferasese or Rhodanese AT5G66170 45.902 2.15e-35 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0152 K22547 - gmx:100794624 298.901