Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0138 ATGGGAGGTTTCAATGGAGAAGAAGGTGTTGTGAGAGAAAAAGAAGAAGAAAACAAGTGGCCTTCATGGCTGCAGCCACTTCTCAAGACACGTTTCTTTGTTCAATGCAAAGTCCACGCAGATTCCCACAAGAGTGAATGCAATATGTATTGCTTGGACTGTGTGAATGGAGCCCTTTGCTCTGCATGTCTCGCTTCCCACAAAGAACACAGAATAATTCAGATAAGGAGGTCTTCGTACCATGATGTGATAAGGGTGTCTGAGATACAGAAATTTCTGGACATAACAGGGGTCCAAACTTACATTATAAACAGTGCCAAGATTGTGTTCTTAAATGAAAGGCCCCAACCTAGACCTGGAAAAGGGGTCACCAATACCTGCCAAGTCTGTGAACGCAGCCTCCTTGATTCCTTCAACTTCTGCTCTCTTGGTTGCAAGATTGTTGGAACCTCCAAAAAGTTCCGGAAGAAGAAAATGTTAGGTGAGGCAGATGGGTCTGATGGTGAAGAATCAGTAAATGGCATAATAAGCAATGCAAGTGCCAGAAACAAAATCCATAGCTTTACACCCTCAACACCACCACCAACAGTGGTTAATTACAGAACTGCCAAGAGGAGAAAAGGAATTCCACATAGAGCTCCAATGGGTGGAGAGCTTATTATAGAATACTAA 672 0.4315 MGGFNGEEGVVREKEEENKWPSWLQPLLKTRFFVQCKVHADSHKSECNMYCLDCVNGALCSACLASHKEHRIIQIRRSSYHDVIRVSEIQKFLDITGVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCERSLLDSFNFCSLGCKIVGTSKKFRKKKMLGEADGSDGEESVNGIISNASARNKIHSFTPSTPPPTVVNYRTAKRRKGIPHRAPMGGELIIEY* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0138 223 Pfam PLATZ transcription factor 76 147 IPR006734 -
Gso12g0138 223 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 10 218 - -
Gso12g0138 223 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 10 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0138 Gso-Chr12 1155964 1158397 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Gso12g0138 PLATZ 3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0138 - - gmx:100810757 442.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0138 12 1155964 1158397 Gso11g0930 11 8360433 8362552 GST