Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0128 ATGGTATCACTCAAATCTGGAAAGAAATTTGTCAAACATTCTATGATTCGGAACGCTGATATGAGACTCGAATCAGGGACTTGTAATGTGTGCTCAGCTGCTTGTTCATCTTGCATGCATCTTAACCAAGCTCTCATGGGGTCTAAGGCTGAAGAATTCTCTGATGAAAACTGTCGCTTAGGGGAGGCTAATCAGTATTGTAATGAGAGTGATAGATCTTCTCTTGGGAGCAGAGCTTGTGAAAGGTTGAAGCATGGTGTCAGTGAAACCAGTCACAGGCCTAGTGTTTCTTCCACTCAAGATTCTCTATCTGAAAATGCTGAGAACAGTCAAGCCTTATCAGAGAAGTATCAGGATTCCAAGTGTTTAGAAAGTCTAGATGATAGCACTTCATGTATCAGTAGGACCAGTAATGCTAATTTAGCGAGCAGTAGCTATCAAATAAATACAGACAAAATAAATATATCTTGTAGTTCAACTTCAGTTAGTCACTTAGTGGCAGAAGGATCTGGAAATGGGCCATCTGTTGACATGTCTAGTTTGTCAGAATGTTGTATGGAAAATGTTGACTCATCATTGACCAAAGAGAGAGTACCTATTATTGTTCCTGGCGAAAAATCTCTGGCAGATAAGGAAAACCTAAATAATGGTACAGCCAAGGTTTCTATAGAAATATGTCAAAAGTCAGAAGCAGATACTGAAAATAATTTTGATGTTGCTGAAGATGTTGATCTTAAATTTTCTGCCCATGATGGACTGCATGAGAAGGTTGAGGAGCTGGTTAAATCACCTGGCAGGGCTGAACCTCAATCGGAAGATGAGAGTGATGAATCAGATGTTGTTGAGCATGATGTAAAAGTATGTGACATCTGTGGAGATGCTGGTCGTGAGGATCTACTTGCCATATGTAGTAGGTGCAGTGATGGTGCAGAACACACCTACTGCATGCGGGAAATGCTTGAGAAGGTCCCTGAAGGGGACTGGTTATGTGAAGAATGCAAGTGTGCGGAGGAGACTGCAAATCAAAAGCTAGATATTGAAGAAAAAAAAAATCATGAAGTTCGTTCAACTTCACGAATTTCTGGCAAAAGACCTTCTCAAAGCATGGAAATAGCTACAGCAGCAAAAAGGCAAGCTCTTGGATCGAGCACAGGATCACCAAAGGCATCAAGCCCCAAGAGAATAGTCCCACTGTTGCGGGAATCTTCATTCAAGAGCATGGATAAAGGAAAGATGAAATCTGGTCAACAGATCCCCATGTGTAACCACCTCGGTGGCAATGACACAGAACTTGCCCGTTCTCTATCCACTGTCCCTCGGGGTCAAAATGCAAGGAGTACATTGCTGAAATCTAATTCATTCAACAACTTCAATTCCAAGCCAAGAGTCAAACTTGTTGATGAAGTTATTCCCCAAAAGCAGAAAGGGGGTGTTGAACATATTTCTAAGAATATGGAGACACCTGCTGGAATGATAAGCAAATCAATGTCATTCAAATCCTCGAATTTGGGTCGTTCAATTGCTGTTGAATCAAAAGTTAAAATGATGTCTTCTAAACCTGGAACTGCTCGGGATTTGAAAGCATCAAGACATACAAAAGATTCTGCTTCATTTGACAGGAAATTTCTGTCTAAGATTGATCGACCTGTCATTTGTTCAACCATGGTTAGTTCTGTTGTTTCCACATCAAAGGGTGATCAGAAGCTTACACCGCATGGCGAAACTGCTAAACCTTCTACAGTCAACAACAATCGAGAGTTTAAGGTCAACCAAGATGGAAAATTATATTCATCATCGAAATCTATCAATAATACAAGCAGTAAAAGTCCAGAACCTCAAGTTAGTTCAGATAGAACATCAACAAGTGTCGATGAAACTCAACAGGATAGGCTGCCTCGATCACAAGATACAGCTAATCAGGTTGACAAAACTAAAGATAGTTCTAGTGATCATGTGACATCAGGTGTTACTAATGCTTCAAAAAGCTCATTCTGTCGTAAATGTAAGGATTTTGGCCATGCTACAGAATGTTGTACAGTTAGTGGTACGCAGGAATTTGGTGCTGAATCATCAGTCATTGCCACAAGTAGTTCAAAAGATGAGATGCATGAGGGAAATAGATTGAAAGCTGCAATCCAGGCAGCTTTGCTTAGAAGGCCTGAAATACACAAGAGGAAAGAAGCTCCTGACCAAACTAATGAGTTTCCTACATCAAGCACTGGTTTGAAACGAGAAGTCACTTCTCAAAAGCAAGTGTTGGTTTCCAGCACTTTGAAGAATGGTATATCTGCTGAAGAAAGCAATATGAAGCAGGAAATCATTGAGAATTCTACATTTGAAACCTCCAAATGTCCATCTGCCAATGATCTGAAACAACTTGAATTTTGTAGAACTGATGTTTGCTCTCAGCTGAGAAAGTCGGATTCTGCTGGTCCCACTTCTGGAAAGCCTGTAGTGAGAGACGACTTTCCCAATAATGCCATGGAAATATCAAGTATTCTTTCAAAGATGTCAGTCATTCCAGAATATGAGTGCATCTGGCAGGGTGTCTTTGTGGTGCATAGAAATGGAATGCCTCCTGACTTGTATACTGGAATTCAAGCACATTTATCTGCATGTGCTTCCCCTAAGGTTCATGAGGTAGTGAAGAAATTTTTACCTGAAGTTTCGCTAAATGAAGTTTCTCGTTTGAGCGTATGGCCTTCACAATTTCATCAAGGTGGTGCTAAGGAAGATAATATTGCTCTTTACTTCTTTGCCAGAGACATTGAAAGTTATGAGAGGTACTACAAGGGTCTATTGGATCACATGATTAGAAATGATTTAGCTCTTAGGGGGACTTTTGATGGTGTTGAACTTCTCATATTTGCATCTAATCAGCTTCTGGAAGATTCACAACGTTGGAATATGTTATTTTTCCTATGGGGTATATTCAGAGGGAGGAGGATCAATCACTTGGATTCCACAAAAAAGATATGTATTCCCAGTTTGAATGTGATGCCAAATGAGAAAGATTTTCCAACTGCTGTAATGACTTTGTCTGAAACTCAGTGTTCACCTAAGCACATGGATAAAGAGTCCATTGACCAAGGTCACAATATGGTTAGTAGGAATTTTGATGGCAAAGAAACTATTTTTGACCAGACACATTTGGGTTTACAAGTAAACTTAGAGAGACAAGACACTAGAATCAACACCAAATCTACATTAGGGATTCCGACCATCAGTACACAAATTTGTCAAGAAGTGAATTCCACTGGTTCGTCCCTGAGAGACAGTGTACCAAAGCATCGACAATACATAAAGTCTAAACCTCCTGAAGCAATGGGAACTAGTGTAAGTAGTAGGATTGTGGAAACAAAAACTAATCATGATATTTCTGTTAAGCAAGAGAACTCTTTGTCTTCGGGGATCCATTCCGTTGGTTGCCAAGAGATAGATACTGCAAGCAATATCAGTAAGGATAAAATTTTGGACAGAACAAACAATGGTGAGAATCAGCAAAGGCCTAAACGGAAACAGATGGAAGATGATCTCGATATTAACGTGGAGGCAACGTTTCAGAGAGACCTGACTGTGAAAGCCGTCAACTGTCAGCTACCTAATGATAAAAAAGTTAAGCATATAGATCTTTCAGATACAGTTGTGGAGGCTTCTGCAGTTAGTTGTCAGAAAATGCCTTGGAATGAGGTAAATGGCAAATTTGAAGACAGAGAAAGTTATAGCAGGGAGCTGCGAACAAGTTTTGGTGGAATTCACGGATGTTATGATTCTGGAGCCTGGGAATCTTTTAATGGTAGTTCTGCATCACTTGTAAATGATCTTGGTTCCTGTTCTTTAGGGGAGGACAAACGGTGTAAAGAACCTTGTGATGAGAAAATCATCCACGAGGACTTTGGAGCGATGGAAAGAACCTTCTTTCCTGTTGATACTCGTAAAAAAAATGACTTGGGGATGGTGCTGAATAGCGAGTCACTGAATGAACCTCGTGAGTACGTGGACCAAGTTCAAGTTGGGATTCCAAATCTAGAGCTTGGTTTGGGGGGTGAAACGAAACCCTCACACAAGGGTATGCTGCCTTTCTTTGTTGGTGCGGTTCACAAGAAAAATAACCAGGAAAAGATTCCAGAAATATTGACATACGAGCGAGAGGATGAGAACGTTGCTGCATCTCTTTCCCTGTCTCTATCTTTTCCATCTTCAAACAAGGAACACGTCAAACCTGTTCCAAAAGCTGAGCCTTTGCCGGGTGGGCATAATGTGAATTCGCCGTATCTTCTTTTTAGGAGATTCACGGACAAATAA 4305 0.4051 MVSLKSGKKFVKHSMIRNADMRLESGTCNVCSAACSSCMHLNQALMGSKAEEFSDENCRLGEANQYCNESDRSSLGSRACERLKHGVSETSHRPSVSSTQDSLSENAENSQALSEKYQDSKCLESLDDSTSCISRTSNANLASSSYQINTDKINISCSSTSVSHLVAEGSGNGPSVDMSSLSECCMENVDSSLTKERVPIIVPGEKSLADKENLNNGTAKVSIEICQKSEADTENNFDVAEDVDLKFSAHDGLHEKVEELVKSPGRAEPQSEDESDESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLEKVPEGDWLCEECKCAEETANQKLDIEEKKNHEVRSTSRISGKRPSQSMEIATAAKRQALGSSTGSPKASSPKRIVPLLRESSFKSMDKGKMKSGQQIPMCNHLGGNDTELARSLSTVPRGQNARSTLLKSNSFNNFNSKPRVKLVDEVIPQKQKGGVEHISKNMETPAGMISKSMSFKSSNLGRSIAVESKVKMMSSKPGTARDLKASRHTKDSASFDRKFLSKIDRPVICSTMVSSVVSTSKGDQKLTPHGETAKPSTVNNNREFKVNQDGKLYSSSKSINNTSSKSPEPQVSSDRTSTSVDETQQDRLPRSQDTANQVDKTKDSSSDHVTSGVTNASKSSFCRKCKDFGHATECCTVSGTQEFGAESSVIATSSSKDEMHEGNRLKAAIQAALLRRPEIHKRKEAPDQTNEFPTSSTGLKREVTSQKQVLVSSTLKNGISAEESNMKQEIIENSTFETSKCPSANDLKQLEFCRTDVCSQLRKSDSAGPTSGKPVVRDDFPNNAMEISSILSKMSVIPEYECIWQGVFVVHRNGMPPDLYTGIQAHLSACASPKVHEVVKKFLPEVSLNEVSRLSVWPSQFHQGGAKEDNIALYFFARDIESYERYYKGLLDHMIRNDLALRGTFDGVELLIFASNQLLEDSQRWNMLFFLWGIFRGRRINHLDSTKKICIPSLNVMPNEKDFPTAVMTLSETQCSPKHMDKESIDQGHNMVSRNFDGKETIFDQTHLGLQVNLERQDTRINTKSTLGIPTISTQICQEVNSTGSSLRDSVPKHRQYIKSKPPEAMGTSVSSRIVETKTNHDISVKQENSLSSGIHSVGCQEIDTASNISKDKILDRTNNGENQQRPKRKQMEDDLDINVEATFQRDLTVKAVNCQLPNDKKVKHIDLSDTVVEASAVSCQKMPWNEVNGKFEDRESYSRELRTSFGGIHGCYDSGAWESFNGSSASLVNDLGSCSLGEDKRCKEPCDEKIIHEDFGAMERTFFPVDTRKKNDLGMVLNSESLNEPREYVDQVQVGIPNLELGLGGETKPSHKGMLPFFVGAVHKKNNQEKIPEILTYEREDENVAASLSLSLSFPSSNKEHVKPVPKAEPLPGGHNVNSPYLLFRRFTDK* 1435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0128 1434 MobiDBLite consensus disorder prediction 360 390 - -
Gso12g0128 1434 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1181 1425 - -
Gso12g0128 1434 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 21 1180 - -
Gso12g0128 1434 MobiDBLite consensus disorder prediction 516 536 - -
Gso12g0128 1434 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 211 349 IPR013083 -
Gso12g0128 1434 MobiDBLite consensus disorder prediction 559 638 - -
Gso12g0128 1434 SMART PHD_3 287 334 IPR001965 -
Gso12g0128 1434 ProSiteProfiles Zinc finger PHD-type profile. 285 336 IPR019787 -
Gso12g0128 1434 PANTHER - 1181 1425 - -
Gso12g0128 1434 PANTHER - 21 1180 - -
Gso12g0128 1434 MobiDBLite consensus disorder prediction 90 116 - -
Gso12g0128 1434 MobiDBLite consensus disorder prediction 260 279 - -
Gso12g0128 1434 MobiDBLite consensus disorder prediction 350 394 - -
Gso12g0128 1434 MobiDBLite consensus disorder prediction 559 657 - -
Gso12g0128 1434 MobiDBLite consensus disorder prediction 85 116 - -
Gso12g0128 1434 SUPERFAMILY FYVE/PHD zinc finger 274 339 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0128 Gso-Chr12 1082835 1091283 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0128 284 371 C2H2 Transcription Factor Family AT3G01460 32.955 1.18e-07 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0128 - - gmx:100781187 2818.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0128 12 1082835 1091283 Gso11g0937 11 8405916 8413504 GST