Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0116 ATGGAAACGTTGTTCATTTTTACAATTTTGTGTCTTTGCCTTTCAGTGATTCTCAAAGCCATATGTAACGTTCTATTTTCTCCCTTCCCTCCTGGGCCTCCCAAATGCAGCTTTAGATTGCTACGACAATACCTCACCGATCCCAAGACCATTCTTCAAAAGCTCCATGCAAAGTATGGTTCAATTTTCGCTGTTCACTTTGGTTATTCTCACGCAGACATTTTCATTGCAAATCGCTTTCTTGCACACCAAGCTTTGATCCAACATGGCACCGTTTTCGCTGATCGCCCCAAGGCTAATCCTACAAACAAGATTATCAGTAGCAACCAACATGACATCCTTTTTAGCTTCTATGGCCCCAAATGGCGCCTCCTTAGGCGCAACCTCACTTCAAGAATCCTTCACCCCTCACAGGTTAAGTCCTATGCACATGCACGCAAATGGGTCTTAGACATGCTCCTACAAAACCTTAAATCTGATTCAGATGCAAGTAACCCCATAAGGGTCATTGATCACTTTCAATATGGCATGTTCTGCTTGCTGGTTTTGATGTGCTTTGGTGACAAACTCGATGAGAAGCAAATAAGGGAAATTGAGGACAGTCAGCGTGACATGCTTGTGAGCTTTGCTAGGTACAGTGTCTTGAATCTTTGGCCATCAATCACAAGGATTTTGTTCTGGAAGGGGTGGAAGGAGTTCTTGCAGAAGCGGAGAGACCAAGAAGCTGTGTTGATTCCTCACATCAACGCTCGAAAGAAGGCTAAGGAAGAGAGATTCGGCAATAGCTCAAGTGAGTTTGTTTTGTCATATGTTGACACTTTGTTGGATTTGCAAATGTTGGAAGATGAGGTTGGGATCAAGCTTGATGATGGTAAAATTTGCACCTTATGTTCGGAGTTTCTGAATGCTGGATCAGATACAACTTCAACTGCATTGGAATGGATCATGGCAAATTTGGTGAAAAACCCCGAAATCCAAGAAAGGGTTGTGGAGGAAATTAGAGTGGTCATGGTTCGTAGAGAGAAGGATAACCAAGTGAAGGAAGAGGATTTGCATAAATTGCCTTATCTCAAGGCTGTGATTTTGGAAGGGTTGAGGCGTCACCCACCATTACACTTTGTGGCTCCTCATAGGGTAACTAAGGATGTTGTTTTAGATGGTTATTTGGTGCCTACTTATGCCTCTGTGAATTTCTTGGTGGCTGAGATAGGGAGGGACCCAACAGCTTGGGATGACCCTATGGCCTTTAAGCCAGAGAGGTTCATGAACAATGGTGAACAAAATGGAGGCACAACTTTTGACATAATGGGAAGTAAAGAGATCAAGATGATGCCGTTTGGGGCAGGGAGGAGAATGTGTCCTGGCTATGCTTTGGCAATTTTGCACTTAGAGTACTTTGTGGCCAATTTTGTTTGGAATTTTGAGTGGAAGGCTGTGGATGGAGATGATGTTGATCTGTCAGAGAAGCTGAAATTCACAACCGTAATGAAGAATCCTTTGAAGGTTCATATATTACCTAGGCAACAATAG 1530 0.432 METLFIFTILCLCLSVILKAICNVLFSPFPPGPPKCSFRLLRQYLTDPKTILQKLHAKYGSIFAVHFGYSHADIFIANRFLAHQALIQHGTVFADRPKANPTNKIISSNQHDILFSFYGPKWRLLRRNLTSRILHPSQVKSYAHARKWVLDMLLQNLKSDSDASNPIRVIDHFQYGMFCLLVLMCFGDKLDEKQIREIEDSQRDMLVSFARYSVLNLWPSITRILFWKGWKEFLQKRRDQEAVLIPHINARKKAKEERFGNSSSEFVLSYVDTLLDLQMLEDEVGIKLDDGKICTLCSEFLNAGSDTTSTALEWIMANLVKNPEIQERVVEEIRVVMVRREKDNQVKEEDLHKLPYLKAVILEGLRRHPPLHFVAPHRVTKDVVLDGYLVPTYASVNFLVAEIGRDPTAWDDPMAFKPERFMNNGEQNGGTTFDIMGSKEIKMMPFGAGRRMCPGYALAILHLEYFVANFVWNFEWKAVDGDDVDLSEKLKFTTVMKNPLKVHILPRQQ* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0116 509 PANTHER CYTOCHROME P450 7 505 - -
Gso12g0116 509 Gene3D Cytochrome P450 26 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g0116 509 SUPERFAMILY Cytochrome P450 29 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g0116 509 Pfam Cytochrome P450 30 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g0116 509 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g0116 509 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g0116 509 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g0116 509 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g0116 509 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 7 505 - -
Gso12g0116 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Gso12g0116 509 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g0116 509 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g0116 509 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g0116 509 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g0116 509 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g0116 509 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso12g0116 509 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0116 Gso-Chr12 998786 1000356 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0116 28 508 Cytochrome P450 AT1G64940 54.175 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0116 K24184 - gmx:100816275 1025