Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0103 ATGAACTGGGATGATGACGAGCGCATACGCCTAATCAATCTTCTTAATTCCTGTGTCAAGCTTACTGAATTAGGCAACTTCAATGCTGCAGATGTTGCATTCTACCATCTCTCTCACCTTGCTTCCCCTGATGGTGATTCAATGCAACGCGTTGCCACTTGTTTCATTGAGGCACTAGCCTATTGCCAAGTGGCCAAAAATTTGCGTGGTGTACCCAAAGTTCTCCATTTGTGGACTAATCTCATCAAGTGTTTAAAACCAAGCACACCAACATGTCCGAAAATTACTATCACAGCCATACATGAGAAGAAGGAGGTGTTAGAGAAAATGGGGTTGCATCTTGGAGTTGAAGCTCAAAGGTTGCTTTTCCCTTTCCAATTCAATCCTGTTGTAAGCAGTTTGGAGAACCTTGACCCTGAGACATTGCCTATCAAGAAAGGTGAGCCTCTTGCTATTAGTTCTGTGCTTCAGCTTCACTCTCTTCTTGCCAGTGATGATGACGATGAGATGGCCAAAATGTAG 522 0.4368 MNWDDDERIRLINLLNSCVKLTELGNFNAADVAFYHLSHLASPDGDSMQRVATCFIEALAYCQVAKNLRGVPKVLHLWTNLIKCLKPSTPTCPKITITAIHEKKEVLEKMGLHLGVEAQRLLFPFQFNPVVSSLENLDPETLPIKKGEPLAISSVLQLHSLLASDDDDEMAKM* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0103 173 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 3 69 - -
Gso12g0103 173 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 78 166 - -
Gso12g0103 173 Pfam GRAS domain family 11 61 IPR005202 -
Gso12g0103 173 Pfam GRAS domain family 78 167 IPR005202 -
Gso12g0103 173 ProSiteProfiles GRAS family profile. 2 173 IPR005202 -
Gso12g0103 173 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 78 166 IPR005202 -
Gso12g0103 173 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 3 69 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0103 Gso-Chr12 890861 891552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0103 5 167 GRAS Transcription Factor Family AT1G50420 34.545 8.90e-29 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso12g0103 GRAS 7.8e-15 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0103 - - gsj:114380243 351.673