Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0099 ATGGCGGACAGCGTGGTTTCCTTTGTTTTAGATCACTTGTCCCAGCTATTGGCACGTGAAGCTAAGTTGTTGTGTGGCGTGGAAGACAGGATCTTGTCCCTCCAAAATGAGCTCGAAATGATCAACGAGTTCCTCAATACCTCAAAGAGCAAGAAGGGGATCGAAAAAATAGTGGTGAGCCAAATCAGAGATGTGGCCCACTTAGCTGAGGATGTCATCGACACATTCCTTGCCAAAGTTGTTGTGCACAAGAGGAGAAGCATGTTGGGAAGGATGCTCCATGGCGTGGACCATGCAAAGTTGCTCCACGATCTATCCGAGAAAATAGACAAGATCAAAATCACCCTGAACGAGATACGCGACAACAAGATCAAATACGTCGAGTTCCAAGAAAGCAACAATCAATCCACAATAAAAGAGGAGGAAAAGGCAGAGTCATTGCACGAGCGTAGAAGAAATGTTGAGGAAGAGGATGTAGTGGGTTTTGTCCATGACTCCAAAGTAGTCATCAAGCAGCTTGTGGAAGGAGGTTCATTGCGTAACGTCTCCATCATTGGCATGGGTGGATTGGGCAAGACCACTCTTGCTCGAAAGGTCTATAACAGCAGTCAGGTAAAACAATACTTTCGGTGCCGCGCTTGGGTTTACGTCTCAAACGAGTGCAGAGTTAGGGAGCTTTTGCTTGATCTTCTTAAGCAGTTGATGCCAAACCCTGAATACGAATATGGAGGCAAAAAGAAAGGCAAGAAACACACTCAAGACGTTTCTAACTTGAGCGAGGAAGAGCTGAAGAAATTGGTGTGGAAACGCTTAGAGAGGAAAAGGTATCTGGTGGTCCTAGATGACATGTGGAAAAGACAAGATTGGGATAAGGTGCAAGATGCTTTTCCAGACAACAACGAAGGCAGCAGAATATTGATCACTAGTCGTTTGAAAGAGTTGGCCTCACATACTAGCCATCATCCTCCTTACTATCTTAAATTCCTCAACGAAGAAGAAAGTTGGGAGCTCTTTTGCAGGAAAGTGTTTAGAGGTGAAGAATACCCTTTTGATTTGGAGCCTCTGGGCAAACAAATAGTTCAAAGCTGTCGCGGTTTGCCCCTCTCAATCATTGTCTTGGCAGGGCTGCTAGCCTACAAGGAAAAGTCATACAAAGAATGGTCTAAAGTGGTTGGTCATGTCAATTGGTATCTTACCCAAGATGAGACCCAAGTAAAGGATATAGTTCTCAAACTCAGTTACGACAACTTGCCAAGGAGATTGAAACCATGCTTTCTGTACCTTGGGATATTCCCTGAAGACTTTGAAATCCCAGTTAGGCCATTATTGCAACTTTGGGTTGCCGAAGGATTTATACAAGAAACAGGGAATAGAGACCCAGATGATGTGGCAGAAGACTACTTGTACGAGCTCATTGATCGTAGTTTAGTCCAAGTAGCAAGAGTGAAGACTAGTGGAGGTGTCAAAATGTGTCGCATACATGATCTTCTCCGAGATCTTTGTATATCAGAGAGCAAAGAGGACAAAGTGTTTGAAGTTTGCACAGATAACAACATTCTAATCTCAACAAAACCTCGTAGACTGTCCATCCTTTGTAACATGGGTCACTACATTTCTTCAAGCAACAACGACCATTCATGTGCCCGTTCTTTGTTCATACCTGGCTCAGGTAACTTTATCAGTCCAAGTGAATTGAAATTGCTTTTAAAAGGTTTCAAATTGGTTCGGGTGTTACACCTTGGAACAGACTCTTTTGGATTAAAGATCCCTTCCAATTTGGGGAACTTTATCCACTTAAGGTACTTGAGAATAGACACCTCGGATGTTAAATTTATTCCAGCTTCTATACTTACCCTTGAAAATCTACAAACCATAGACTTAGGTCATTTTTGGAATTTGACTTTCCCAATTTCTTTCCCTGCTGGAATATGGAAACTCAATCATTTAAGACATTTGTATACACAAGGACCTATCAAGCTACGAGGCCACTGTTCAGGTTCAAATGAGGTTATGTTGAATCTTCAAACCATCTTTGCCATTGTACTCGATCGACAAACAATATCTCTGATAAAGAAAGTAAGGTTTCCCAATCTTAAAAAATTAGGGTTGCAAGTGTCTTCAAGTTGCAAAGACCAAGTACCTGAGTTGTTGCAGAGCCTACACCCATTATGTCATTTGAAGAACTTACGCATTTACCTCAAAGGTAAGCGTGCTTCAGGTACGTTGCCCCCAAACCATGAGAGCATGGAATGGAACATTGGTTGTAAGCCACAAGAACTATTACAAAGCCTAGGTCAATTGAGTTGTCTAACTGCGTTAAGAATTATGAATGTCTTCGACCTTCTAACCTGTGGGGTTGTCACATTTCCTCCAAATATTACAAAATTAACGTTGTCAGGTATTAAGTGCATCACTGACGGGGGGATGAAAGCGTTGGGAAATCTCACCAAACTTGGAATTTTGAGACTTAGAGGATCTTCAGATGATTCTTTCGACCTAAATTGCGTTGAAGGTGGGTTCCCACAATTGCAAGTGCTTGAGATGAGTTTGTTGGGAGTTGGAAATTGGAAATTAGGCAATGGTACAATGTTACGCCTTCAAAGTTTGGTCATCAATTACTGTGAAGGGTTAAATGATCTCCCAAATGAACTGTGGTCGTTGACTGACTTAAGAAAAGTGCGAGTATGGCAACCCTCGGAACCAATGGCTCACATGCTAAGGAATTTGAAAATAAAGAATGCGGTTGAACTCGTAATCGTCGAGGATTATTAG 2772 0.4217 MADSVVSFVLDHLSQLLAREAKLLCGVEDRILSLQNELEMINEFLNTSKSKKGIEKIVVSQIRDVAHLAEDVIDTFLAKVVVHKRRSMLGRMLHGVDHAKLLHDLSEKIDKIKITLNEIRDNKIKYVEFQESNNQSTIKEEEKAESLHERRRNVEEEDVVGFVHDSKVVIKQLVEGGSLRNVSIIGMGGLGKTTLARKVYNSSQVKQYFRCRAWVYVSNECRVRELLLDLLKQLMPNPEYEYGGKKKGKKHTQDVSNLSEEELKKLVWKRLERKRYLVVLDDMWKRQDWDKVQDAFPDNNEGSRILITSRLKELASHTSHHPPYYLKFLNEEESWELFCRKVFRGEEYPFDLEPLGKQIVQSCRGLPLSIIVLAGLLAYKEKSYKEWSKVVGHVNWYLTQDETQVKDIVLKLSYDNLPRRLKPCFLYLGIFPEDFEIPVRPLLQLWVAEGFIQETGNRDPDDVAEDYLYELIDRSLVQVARVKTSGGVKMCRIHDLLRDLCISESKEDKVFEVCTDNNILISTKPRRLSILCNMGHYISSSNNDHSCARSLFIPGSGNFISPSELKLLLKGFKLVRVLHLGTDSFGLKIPSNLGNFIHLRYLRIDTSDVKFIPASILTLENLQTIDLGHFWNLTFPISFPAGIWKLNHLRHLYTQGPIKLRGHCSGSNEVMLNLQTIFAIVLDRQTISLIKKVRFPNLKKLGLQVSSSCKDQVPELLQSLHPLCHLKNLRIYLKGKRASGTLPPNHESMEWNIGCKPQELLQSLGQLSCLTALRIMNVFDLLTCGVVTFPPNITKLTLSGIKCITDGGMKALGNLTKLGILRLRGSSDDSFDLNCVEGGFPQLQVLEMSLLGVGNWKLGNGTMLRLQSLVINYCEGLNDLPNELWSLTDLRKVRVWQPSEPMAHMLRNLKIKNAVELVIVEDY* 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0099 923 PANTHER - 41 917 - -
Gso12g0099 923 Gene3D - 5 98 - -
Gso12g0099 923 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 428 IPR027417 -
Gso12g0099 923 SUPERFAMILY L domain-like 492 894 - -
Gso12g0099 923 Gene3D Ribonuclease Inhibitor 545 734 IPR032675 -
Gso12g0099 923 PANTHER DISEASE RESISTANCE PROTEIN RP 41 917 IPR044974 GO:0006952
Gso12g0099 923 Coils Coil 102 122 - -
Gso12g0099 923 CDD RX-CC_like 2 121 IPR038005 -
Gso12g0099 923 Gene3D - 142 322 IPR027417 -
Gso12g0099 923 Gene3D Ribonuclease Inhibitor 752 912 IPR032675 -
Gso12g0099 923 PRINTS Disease resistance protein signature 181 196 - -
Gso12g0099 923 PRINTS Disease resistance protein signature 270 284 - -
Gso12g0099 923 PRINTS Disease resistance protein signature 363 377 - -
Gso12g0099 923 PRINTS Disease resistance protein signature 617 633 - -
Gso12g0099 923 Pfam NB-ARC domain 168 416 IPR002182 GO:0043531
Gso12g0099 923 Gene3D - 328 413 IPR042197 -
Gso12g0099 923 Gene3D - 414 504 IPR036388 -
Gso12g0099 923 Pfam Rx N-terminal domain 5 85 IPR041118 -
Gso12g0099 923 Coils Coil 137 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0099 Gso-Chr12 853496 856656 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0099 167 500 WRKY Transcription Factor Family AT5G45050 24.251 1.96e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0099 - - gmx:100814688 1685.23