Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0098 ATGGCCAAAAAGAAGAGCTGGTTTAGTCTGGTGAAGAGGCTCTTTATATGGGACACACATTCCACACAAGATAAGGAGAAAAGAAGGAAATGGATATTTGGAAGGCTAAAGAGCAAGAGATTGCCTTCAATTAAAGCTCCACTACCCTCAAAAGGAACAACACTAAGTGAGGCAGAGCAAGAACAGAGCAAGCATGCTTTAACAGTGGCCATTGCCTCAGCAGCAGCTGCTGAAGCTGCTGTTACTGCTGCTCATGCTGCTGCTGAGGTTGTTCGCCTCACTGGGCAACGCAAGGAAAACTCAGAAGAATCTCAACCTGTTAAAACTAGGAATGGTGCTCCACAATCCACATACCAGTGCCAGAGGGAGATTAAAGAATCTGCTGCAGCCATCAAAATTCAAACTGCATTTCGGGGTTACCTGGCAAGGAAGGCTTTGAGGGCGTTGAAGGGAATAGTGAAGCTTCAAGCTATCATTCGTGGCAGAGCCGTAAGACGCCAAGCTATGAGTACTCTTAAGTGCTTACAGTCCATTGTGAGCATCCAGTCACAGGTCTGTGCAAGGAGGCTCCAAATGGTTGAAGGGAGATGTGATTACTCTGAAAATGAAGAGATGCAAGATTCTAAAGACAAAATAATTAGGATGGACTCAAACAGTGAAAGAAAGTGGGATGAAAGCACTGTATTGAAGGAAGAGGTAGACACCTCTTGCACAAGCAAGAGAGAAAGAACAAAAGAATACTCATTTAACCACAGAAGGTCAGCAGAGTCAGAAAGAAGTAAAGTAAATGGAAGATGGAGGTACTGGCTAGAGCAGTGGGTAGATACACAACTTTCAAAGAGTAAAGAGCTTGAAGATTTAGACTCAGTTTTTAGCTCACATTCTAGAGCTGGGGAGGAATATGGAGGAAGGCAACTTAAGCTGAGAAGTAATATTCAGAGACAAAATCCAGTTGAAGGATTGGATTCTCCAATACTTGGTTCAAGAAGATCTTTTCCTCATAGGAGGCAGTGTTCAGTGGGAGAGGACCACTCATTTTTAAGCTCTCCTGCAACTCCAGCATACATGGCTGCAACAGAATCAGCAAAAGCAAAAGCAAGATCAACAAGCTCCCCAAAAATAAGGACTGGGGGGAATGTGGACATGAACTCTGATAGCTATTCACCATGCAAGAAAAAGCTATCCATTGCATCTTCTATTAACAGTGAAATGCTTAGTAATGGTAGGGTGGGCAAGCTCAGTGTTAACCAGCAGCAAAGATCACCAAGCTTTAAGGGACTTTCAGTGCCTATAAAATCAAGCCGAACAACTATCAAGGATCTCAGTATTAATTCAGATTGCTCACTCCCTAATTGGGATCGACAGGCTTCCTTCAAATGA 1380 0.4341 MAKKKSWFSLVKRLFIWDTHSTQDKEKRRKWIFGRLKSKRLPSIKAPLPSKGTTLSEAEQEQSKHALTVAIASAAAAEAAVTAAHAAAEVVRLTGQRKENSEESQPVKTRNGAPQSTYQCQREIKESAAAIKIQTAFRGYLARKALRALKGIVKLQAIIRGRAVRRQAMSTLKCLQSIVSIQSQVCARRLQMVEGRCDYSENEEMQDSKDKIIRMDSNSERKWDESTVLKEEVDTSCTSKRERTKEYSFNHRRSAESERSKVNGRWRYWLEQWVDTQLSKSKELEDLDSVFSSHSRAGEEYGGRQLKLRSNIQRQNPVEGLDSPILGSRRSFPHRRQCSVGEDHSFLSSPATPAYMAATESAKAKARSTSSPKIRTGGNVDMNSDSYSPCKKKLSIASSINSEMLSNGRVGKLSVNQQQRSPSFKGLSVPIKSSRTTIKDLSINSDCSLPNWDRQASFK* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0098 459 Gene3D - 124 176 - -
Gso12g0098 459 PANTHER IQ-DOMAIN 11 5 445 - -
Gso12g0098 459 ProSiteProfiles IQ motif profile. 150 177 IPR000048 GO:0005515
Gso12g0098 459 Pfam Protein of unknown function (DUF4005) 337 420 IPR025064 -
Gso12g0098 459 PANTHER IQ-DOMAIN 5-RELATED 5 445 - -
Gso12g0098 459 ProSiteProfiles IQ motif profile. 126 154 IPR000048 GO:0005515
Gso12g0098 459 Pfam IQ calmodulin-binding motif 128 147 IPR000048 GO:0005515
Gso12g0098 459 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 116 168 IPR027417 -
Gso12g0098 459 MobiDBLite consensus disorder prediction 363 387 - -
Gso12g0098 459 MobiDBLite consensus disorder prediction 94 117 - -
Gso12g0098 459 SMART iq_5 125 147 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0098 Gso-Chr12 848415 851867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0098 1 459 IQD Protein Family AT5G13460 45.228 2.19e-108 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0098 - - gmx:100813620 859.366