Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0077 ATGGACATTGATGATGATTTCACATTTTGTCAGAAGGAGGCTACCGTTGGTTCTTTGTCTTTCACTGTAACTAGCACAGCTTCTAGTCGGCCAAATGAATCCACCACAAAATTAGTACCAACTCAGGCTAACATTTCGTCTCTAAAGTCACCGGCACAGAAGAATTCCGTTAAGAAGCCAACGGTTCGGGCCAAAGTTCCTTTTGAGAAAGGCTACAGTCAAATGGACTGGCTCAAGCTCACCCAAACACATCCTGACCTTGCAGGTCTGAAAGGGCAGTCAAACAAGAGACTTATTTCTATGGATGAAGTTAGAAAACACCAGACAGAGGGCCAAATGTGGACTGTATTAAAAGGCCGTGTTTATAATATATCTCCATACATGAAGTTTCACCCTGGAGGTGTTGATATGTTGATGAAGGCGGTGGGAAAAGATTGCACATCTTTATTCAATAAATACCATGCTTGGGTTAATGCTGAATTCTTATTGGAAAAATGCTTTGTGGGTACCTTAGATGAAGGTCAGTGA 528 0.4186 MDIDDDFTFCQKEATVGSLSFTVTSTASSRPNESTTKLVPTQANISSLKSPAQKNSVKKPTVRAKVPFEKGYSQMDWLKLTQTHPDLAGLKGQSNKRLISMDEVRKHQTEGQMWTVLKGRVYNISPYMKFHPGGVDMLMKAVGKDCTSLFNKYHAWVNAEFLLEKCFVGTLDEGQ* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0077 175 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 96 172 IPR001199 -
Gso12g0077 175 PRINTS Cytochrome B5 signature 121 131 IPR001199 -
Gso12g0077 175 PRINTS Cytochrome B5 signature 131 145 IPR001199 -
Gso12g0077 175 PRINTS Cytochrome B5 signature 159 171 IPR001199 -
Gso12g0077 175 PANTHER FERREDOXIN 11 166 - -
Gso12g0077 175 SMART Cyt_b5_2 99 172 IPR001199 -
Gso12g0077 175 Gene3D - 93 174 IPR036400 -
Gso12g0077 175 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 95 174 IPR036400 -
Gso12g0077 175 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 127 134 IPR018506 GO:0020037
Gso12g0077 175 PANTHER CYTOCHROME B5 DOMAIN-CONTAINING PROTEIN RLF 11 166 - -
Gso12g0077 175 Pfam Cytochrome b5-like Heme/Steroid binding domain 101 171 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0077 Gso-Chr12 662030 665648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0077 97 173 NADPH P450 reductases AT1G26340 42.857 2.99e-17 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0077 - - gmx:100806129 340.117