Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0070 ATGGCAATAGCGATAACGCAATGTTCAGAAAAGCTAGGCTACCTTATACTTCAATTAGGCAAAAATTTCCTTGTGTTCATGGCCATGGTGGTTGCATGCAATGGTGCACATTTCCTACTAAAGCCTTATTCACAACCTCGCGTTGCTTCTGACATAATGGTAGGACTAATTATGGGGAACATACCTTTTTTACGTGAACTATATGAAGAATTCAACAAGACCTTTGGATTTATCATTGATTTTGGCATGATGTGTTACATGTTTGCTTTGGGTATAGAGATGGATCCTTACATGCTCTTCAAGAGACCAACAAAGGATGCTCAAGTTGCTTATGCAGCAATATTGTGCACTTTCATCATATGCTGTTCCATGACACCACTCTTCCGTTACTTCACACACCAACATGGATTAGCATTCACCCTCTCCCTCTCTGCTCTTGTCTCCAGCACGGCGTCTCCCGTTCTCACGCGTCTAATAACCAGCCTCAAAATAGGAAAATCAGACATTGGAAGCCTTGTCATAGGTGCCGGGATGCACTCGGATTTCCTCTGCTCATTGCTTCTTTCAGTTGGCTACATTTTCATGCCATCGGATGCTTATTGCATTGGCACTAAAAAAGACAAGACTCTGCTGACCATCATCACAGTGAGCATTGTAATTGTAGCACAGACAATGTTCACAGCGGTGGTTTCGCCAGTATTTATGGCATGGGTGAACAATGAAAACCCTGAAGGGAAACCCATGAAAGGATCACACCTGATACTGTCAATTGCCTTCGTGGTAATGATTTGTGCCTCCTCAACTCTATACGACTATAGTCCGGTTCTAAGTGCGTTTATGACAGGGATATGTTTACCCAGGGAGGGTAGAGTTTCCAAATGGGTTGTCAGCAAAATCAACTCTCTCTTGACAACCATCTTCTTTCCCGTCTTCTTCTTGTGGATGGGGTATGTGGCTGATATCACCAAATTCGACCCTGGAGACCCTACAACGTGGCTAAGAGTGATTTTACCCATTGCCATAGTGGTCGTGGGTAAAGTTGTTGGCACACTTGTTGCTGGGGCACTGCTTGGCTTTCACTGGCCAGAATCAATTGCAATCGGATTGCTCCTTATCACCAAGGGCCATTTTCAAATCTACATGGCTATCAAAGGGCTGAGTTGTGGCACCGCCACTACTTCCTCCTCCGGCATTATTTCGGTAATTACAATATTTTTAACATTGGTGCATGCCCCCATAGTCGTGGCACAAATCATCAAACGTGCCAGGAAAAGGGCACCTACTCACAGCAACGCCCTCCAATTACTGGACCCATTAAGTGAGCTAAGGATATTCTTGTGCCTTCACGGACTTGATAATGTTCCTGCTTCCATCAACTTCATGGAGATCTCAAGGGGGTCAGCAGACTCTGGTATTCTGGTATATGTTGCAGAAATTATTGAATTAACTGATCAAATAGCAGCAACAATGGAGAGTGGTGAAGGAGTGCATACAACAACTATAAAAGACAAGGAAGTGACAGAGATAAGAGAACAAGTAACCAGCTCCTTTCAAGCCTATGTAGATAGAGATGGCGATGGGATTACATTCAAAAGATCACTGGCAGTGTCAACAATCACTAACATGGCAAAGAATATCTGCGTCTTAGCAGAGGACTTGATGATTGCCCTCATCATACTTCCATTCCACAGGAAACAGCGTCAGGATGGAAAACTGGATGGTGGCAATCCAGGCTTCAGATACGTGAACCGGAAGTTATTGAAGAGTGCTCCTTGTTCCGTGGGGATTCTAGTGAACAGAGGTTTCGGATCCATCGAGAAAATATCAAGGTTTGAGGCATTGCTTAAAGTGGCAGTAATATTCATTGGTGGAAAAGATGATAGAGAAGCACTTGCCTATGTGGGTCGTGTAGCATGGCATCCGGGAGTAAAAGTGATAGTAATAAGATTCCTGGTAGATACCAATGAAGAATCTTCAAGACTGGCAGCGCATAGGGTAACCCTTACAGAGCAAGAGGAGGAGATGGGGTTGGATGATGAATGCTTTGCACAGTTCTATGAAAGGTATATAGTTGGAGGTCGCATATCCTATATGGAGAAGCATCTTGCAAATGCATCTGAGACCTTCTCTACTCTGAGATCATTTGAAGGACAATACTCACTGGTCATTGTAGGAAGAGAAGGTGGAGCAAACTCTATATTGACAAAGGGGATGAATGACTGGCAACAGTGCCCAGAACTGGGACCAATAGGGGATGTTCTTTCAGGACCAGACTTCTCAACGTCAGTATCTGTGTTAATAATCCAACAACACAAACTTAGGGGAGAATTAGATGGACTTGACGAGGAATTCTCTATCATGTAG 2364 0.4387 MAIAITQCSEKLGYLILQLGKNFLVFMAMVVACNGAHFLLKPYSQPRVASDIMVGLIMGNIPFLRELYEEFNKTFGFIIDFGMMCYMFALGIEMDPYMLFKRPTKDAQVAYAAILCTFIICCSMTPLFRYFTHQHGLAFTLSLSALVSSTASPVLTRLITSLKIGKSDIGSLVIGAGMHSDFLCSLLLSVGYIFMPSDAYCIGTKKDKTLLTIITVSIVIVAQTMFTAVVSPVFMAWVNNENPEGKPMKGSHLILSIAFVVMICASSTLYDYSPVLSAFMTGICLPREGRVSKWVVSKINSLLTTIFFPVFFLWMGYVADITKFDPGDPTTWLRVILPIAIVVVGKVVGTLVAGALLGFHWPESIAIGLLLITKGHFQIYMAIKGLSCGTATTSSSGIISVITIFLTLVHAPIVVAQIIKRARKRAPTHSNALQLLDPLSELRIFLCLHGLDNVPASINFMEISRGSADSGILVYVAEIIELTDQIAATMESGEGVHTTTIKDKEVTEIREQVTSSFQAYVDRDGDGITFKRSLAVSTITNMAKNICVLAEDLMIALIILPFHRKQRQDGKLDGGNPGFRYVNRKLLKSAPCSVGILVNRGFGSIEKISRFEALLKVAVIFIGGKDDREALAYVGRVAWHPGVKVIVIRFLVDTNEESSRLAAHRVTLTEQEEEMGLDDECFAQFYERYIVGGRISYMEKHLANASETFSTLRSFEGQYSLVIVGREGGANSILTKGMNDWQQCPELGPIGDVLSGPDFSTSVSVLIIQQHKLRGELDGLDEEFSIM* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0070 787 Pfam Sodium/hydrogen exchanger family 26 414 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gso12g0070 787 PANTHER CATION/H + ANTIPORTER 4 785 - -
Gso12g0070 787 PANTHER CATION/H+ EXCHANGER 3 4 785 - -
Gso12g0070 787 Gene3D - 21 428 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0070 Gso-Chr12 593552 596911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0070 24 787 Antiporter Super Family AT3G52080 48.972 0.0 782
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0070 - - gmx:100815945 1503.8