LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso12g0070	ATGGCAATAGCGATAACGCAATGTTCAGAAAAGCTAGGCTACCTTATACTTCAATTAGGCAAAAATTTCCTTGTGTTCATGGCCATGGTGGTTGCATGCAATGGTGCACATTTCCTACTAAAGCCTTATTCACAACCTCGCGTTGCTTCTGACATAATGGTAGGACTAATTATGGGGAACATACCTTTTTTACGTGAACTATATGAAGAATTCAACAAGACCTTTGGATTTATCATTGATTTTGGCATGATGTGTTACATGTTTGCTTTGGGTATAGAGATGGATCCTTACATGCTCTTCAAGAGACCAACAAAGGATGCTCAAGTTGCTTATGCAGCAATATTGTGCACTTTCATCATATGCTGTTCCATGACACCACTCTTCCGTTACTTCACACACCAACATGGATTAGCATTCACCCTCTCCCTCTCTGCTCTTGTCTCCAGCACGGCGTCTCCCGTTCTCACGCGTCTAATAACCAGCCTCAAAATAGGAAAATCAGACATTGGAAGCCTTGTCATAGGTGCCGGGATGCACTCGGATTTCCTCTGCTCATTGCTTCTTTCAGTTGGCTACATTTTCATGCCATCGGATGCTTATTGCATTGGCACTAAAAAAGACAAGACTCTGCTGACCATCATCACAGTGAGCATTGTAATTGTAGCACAGACAATGTTCACAGCGGTGGTTTCGCCAGTATTTATGGCATGGGTGAACAATGAAAACCCTGAAGGGAAACCCATGAAAGGATCACACCTGATACTGTCAATTGCCTTCGTGGTAATGATTTGTGCCTCCTCAACTCTATACGACTATAGTCCGGTTCTAAGTGCGTTTATGACAGGGATATGTTTACCCAGGGAGGGTAGAGTTTCCAAATGGGTTGTCAGCAAAATCAACTCTCTCTTGACAACCATCTTCTTTCCCGTCTTCTTCTTGTGGATGGGGTATGTGGCTGATATCACCAAATTCGACCCTGGAGACCCTACAACGTGGCTAAGAGTGATTTTACCCATTGCCATAGTGGTCGTGGGTAAAGTTGTTGGCACACTTGTTGCTGGGGCACTGCTTGGCTTTCACTGGCCAGAATCAATTGCAATCGGATTGCTCCTTATCACCAAGGGCCATTTTCAAATCTACATGGCTATCAAAGGGCTGAGTTGTGGCACCGCCACTACTTCCTCCTCCGGCATTATTTCGGTAATTACAATATTTTTAACATTGGTGCATGCCCCCATAGTCGTGGCACAAATCATCAAACGTGCCAGGAAAAGGGCACCTACTCACAGCAACGCCCTCCAATTACTGGACCCATTAAGTGAGCTAAGGATATTCTTGTGCCTTCACGGACTTGATAATGTTCCTGCTTCCATCAACTTCATGGAGATCTCAAGGGGGTCAGCAGACTCTGGTATTCTGGTATATGTTGCAGAAATTATTGAATTAACTGATCAAATAGCAGCAACAATGGAGAGTGGTGAAGGAGTGCATACAACAACTATAAAAGACAAGGAAGTGACAGAGATAAGAGAACAAGTAACCAGCTCCTTTCAAGCCTATGTAGATAGAGATGGCGATGGGATTACATTCAAAAGATCACTGGCAGTGTCAACAATCACTAACATGGCAAAGAATATCTGCGTCTTAGCAGAGGACTTGATGATTGCCCTCATCATACTTCCATTCCACAGGAAACAGCGTCAGGATGGAAAACTGGATGGTGGCAATCCAGGCTTCAGATACGTGAACCGGAAGTTATTGAAGAGTGCTCCTTGTTCCGTGGGGATTCTAGTGAACAGAGGTTTCGGATCCATCGAGAAAATATCAAGGTTTGAGGCATTGCTTAAAGTGGCAGTAATATTCATTGGTGGAAAAGATGATAGAGAAGCACTTGCCTATGTGGGTCGTGTAGCATGGCATCCGGGAGTAAAAGTGATAGTAATAAGATTCCTGGTAGATACCAATGAAGAATCTTCAAGACTGGCAGCGCATAGGGTAACCCTTACAGAGCAAGAGGAGGAGATGGGGTTGGATGATGAATGCTTTGCACAGTTCTATGAAAGGTATATAGTTGGAGGTCGCATATCCTATATGGAGAAGCATCTTGCAAATGCATCTGAGACCTTCTCTACTCTGAGATCATTTGAAGGACAATACTCACTGGTCATTGTAGGAAGAGAAGGTGGAGCAAACTCTATATTGACAAAGGGGATGAATGACTGGCAACAGTGCCCAGAACTGGGACCAATAGGGGATGTTCTTTCAGGACCAGACTTCTCAACGTCAGTATCTGTGTTAATAATCCAACAACACAAACTTAGGGGAGAATTAGATGGACTTGACGAGGAATTCTCTATCATGTAG	2364	0.4387	MAIAITQCSEKLGYLILQLGKNFLVFMAMVVACNGAHFLLKPYSQPRVASDIMVGLIMGNIPFLRELYEEFNKTFGFIIDFGMMCYMFALGIEMDPYMLFKRPTKDAQVAYAAILCTFIICCSMTPLFRYFTHQHGLAFTLSLSALVSSTASPVLTRLITSLKIGKSDIGSLVIGAGMHSDFLCSLLLSVGYIFMPSDAYCIGTKKDKTLLTIITVSIVIVAQTMFTAVVSPVFMAWVNNENPEGKPMKGSHLILSIAFVVMICASSTLYDYSPVLSAFMTGICLPREGRVSKWVVSKINSLLTTIFFPVFFLWMGYVADITKFDPGDPTTWLRVILPIAIVVVGKVVGTLVAGALLGFHWPESIAIGLLLITKGHFQIYMAIKGLSCGTATTSSSGIISVITIFLTLVHAPIVVAQIIKRARKRAPTHSNALQLLDPLSELRIFLCLHGLDNVPASINFMEISRGSADSGILVYVAEIIELTDQIAATMESGEGVHTTTIKDKEVTEIREQVTSSFQAYVDRDGDGITFKRSLAVSTITNMAKNICVLAEDLMIALIILPFHRKQRQDGKLDGGNPGFRYVNRKLLKSAPCSVGILVNRGFGSIEKISRFEALLKVAVIFIGGKDDREALAYVGRVAWHPGVKVIVIRFLVDTNEESSRLAAHRVTLTEQEEEMGLDDECFAQFYERYIVGGRISYMEKHLANASETFSTLRSFEGQYSLVIVGREGGANSILTKGMNDWQQCPELGPIGDVLSGPDFSTSVSVLIIQQHKLRGELDGLDEEFSIM*	788

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso12g0070	787	Pfam	Sodium/hydrogen exchanger family	26	414	IPR006153	GO:0006812\|GO:0015299\|GO:0016021\|GO:0055085
	Gso12g0070	787	PANTHER	CATION/H + ANTIPORTER	4	785	-	-
	Gso12g0070	787	PANTHER	CATION/H+ EXCHANGER 3	4	785	-	-
	Gso12g0070	787	Gene3D	-	21	428	IPR038770	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso12g0070	Gso-Chr12	593552	596911	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso12g0070	24	787	Antiporter Super Family	AT3G52080	48.972	0.0	782

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso12g0070	-		-	gmx:100815945	1503.8

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