Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0036 ATGTCGTCCACCACTCCTCCGCTGAAACCCGACCAATGCGATCCCGTGCCGGGGACACCGTCATCGCCCGCCGGCAGAGGTAAGCTCCAGAAGATTCCGCCGATTCCTATTCGACGGAGTAAGGTATCATCATCATCAACAACAACACACGCAGGCAATGCCGACGAAGAGCAAGAGGAAGATTCTTCTTCCATCTTGCTCGCCTCGTCTCTTGGTCTCAATCACATTCGAACGCGTTCTTCATCCTTTCCTCTTCGCTATTCCTCCTCCCTTGGTGCACCTTCCTTCTTGACACAGGATGCTGTCACTGTTAATGACGCCAGACTTAGATCCAAATCTAATAATTCCCATCCAAGAAAAGTCCTAGCTCTTTTAGGGGGAAAAGTTCATTTGGGTAAATCCAAAACGTTGAGACCTCATTCGCAACTCATTCCCGGGCTAGAGGGTCATCATGCAGCTTTCACCAAAGAAATGCAATCCCCACGTTTTCAGGAAATCCTGCGACTTACCAGTGGACGCAAAAAGAGAAACCCTGATATTAAAAGTTTTTCCCATGAACTCAACTCCAAAGGAGTTAGACCATTTCCAATCTGGAAACATCGTGCCTTTGGCCACATGGAGGAAGTCATGGCGGCAATCAGATTTAAGTTTGAAAAACTAAAGGAAGAAGTTGACTCTGACTTGGGTGGTTTTGCTGGAGATTTGGTGGGCATTCTTGAAAAGAATTTAGTGGCTGATCGTGAATGGAAAGAGAGGTTGGAGGATCTGTTGGTTGTTACTCAACAATGTGCAAAGATGACTCCTACCCAGTTTTGGATCAAATGTGAATCTATTGTTCAAAACCTAGATGACAAACGTCAAGAATTACCAGTGGGGATACTCAAGCAAACTCATACACGCCTACTGTTTATTCTCACTCGTTGCACTCGCCTAGTGCAGTTCCAGAAGGAAAGCGGATATGAACAAGATCACATTCTAGGTCTTCACCAATTCAGCGATCTTGGGGTTTATCCTGAGCAAATTTTCAAGGCTGTACAGCAGAAATCCAGTATTCCATCTGCTGGACATGAGATGCCTGAGAAACAGTTAAAAATGTCACATGGTAAAGAGAAAGACAAACCAATAACAGAACAAAGTCAAGCTGACCAACACGTAAGTGTTGCAATTGACAATGAAGAGGTTGCTACAGCCAAAAGTATCGAATCAACTCCTGGAACATATAAGATGTCTTCTTGGAGAAAGCTTCCATCTGCTGGTGAGAAAAAGCGAAAAGATCAAGATGCTGTAGATTTCCCATCCAAAGGTGAACTGGATCACTTGCTAGTCAAAGACGAAAATTGTGAAAATTTGGATACTTTGTCATGTCATCCTGAACATTCACAATCATCATCAAGAGCACGAAAGGTTTCTTGGGGATTCTGGGGAGATCAGCAAAATCTAACATACGAGGATTCCATGATATGCAGGATTTGTGAGGTTGAAATACCAATTGTACATGTGGAGGAGCATTCTAGGATATGCACAATTGCTGATAGATGTGATTTGAAAGGCTTAACTGTAAATGAACGGCTTGAAAGAGTTTCTGAAACCATTGAAAGGATACTGGAATCCTGGACACCAAAAAGCACACCAAAAAGCACTGATACTTCTGGAGAAAGCTTTGAGCTTGCTGCAGTGTCAACATCAAGTGTGCATGAAGAGTTCAATGATTTATCTCTAGAGAGAAATAACCTGACTTGTAGATGCTCTGAAGACATGCTTGACTCGGGTGTGGAGCCTGACAATACTTTTGCCATGGAGGATCTGAACCTTTCATCTGGAATATCATGTGAAGCACACATCTGCTTAAAAACTGATCATGGAACAAAGTTATCTTCCGCTGGAAGCTTGACACCCAGATCACCATTGATAACACCACGAACCACACAGATAGAAATTTTATTAAGTGGGCGAAGAACACTATCTGAACTTGAAAGTTGTGACCAGATAAGCAAGCTAGTTGAAATAGCCCGTGCTGTTGCAAATGTGAACAACTGTGACTACAGAGCTCTGGAGTATATGCTTGATCGCTTAGAAGACCTGAAATATGCCATTCAAGACAGAAAAGTGGATGCACTTATTGTGGAGACTTTTGGACGACGAATAGAGAAACTTTTGCAGGAGAAATATCTCTCACTCTGTGGGCAGATAGAAGATGAAAAGGTGGACTCATCAACTAGTATGGCTGATGAAGAGAGTTCAGTGGAAGATGATACAGTTCGTAGCCTTCGTGCTAGCCCTATTAATGCTTGCTCCAAGGACAGAACCTCTATCGAAGACTTTGAAATAATAAAACCAATAAGTAGGGGCGCATTTGGACGAGTTTTTCTTGCCCGAAAAAGAGCAACTGGGGATTTATTTGCTATAAAGGTTCTGAAAAAGGCAGATATGATCCGTAAAAATGCAGTTCAAAGTATTTTGGCAGAGCGAGATATCCTTATATCTGTTCGAAACCCTTTTGTGGTCCGATTTTTCTACTCTTTCACATGTAGGGAAAATCTTTATCTAGTTATGGAGTATTTGAATGGTGGAGATCTTTATTCTATTCTGAGAAATCTAGGTTGCTTAGATGAAGATATGGCTCGTGTATATATTGCAGAAGTTGTTCTTGCATTGGAGTATTTGCATTCCTTAAATGTGATTCACAGAGACTTGAAGCCAGATAACTTACTGATTGGTCAAGATGGTCATATTAAGTTGACAGATTTTGGGCTCTCCAAGGTTGGTCTTATCAACAGCACAGATGATTTATCAGCGCCATCATTTTCCGATAATGGTTTCCTAGGAGATGATGAACCAAAATCTCGACATTCTTCAAAAAGGGAAGAACGTCAAAAACAATCAGTAGTTGGCACCCCGGATTATTTGGCACCTGAAATACTTCTTGGCATGGGACATGGTGCAACAGCAGATTGGTGGTCCGTGGGTGTCATACTTTATGAGCTTCTTGTGGGTATTCCACCATTTAATGCAGAACATCCACAGCAAATTTTTGATAACATAATTAACAGAGACATACAATGGCCCAAGATTCCCGAGGAGATCAGCTTTGAAGCATATGATTTGATAAATAAATTATTGAATGAAAATCCAGTCCAAAGATTAGGTGCAACGGGAGCTACAGAAGTTAAACGCCACGCTTTCTTCAAGGATATTAATTGGGATACCCTAGCAAGGCAGAAGGCTATGTTCATTCCAATGGCTGAAGCTCTTGATACAAGTTATTTCATGAGCCGGTACATTTGGAATCCCGAGGATGAACATTGTCTTGGAGGTAGTGATTTTGATGAGATTACTGAAACATGCAGCAGTGGTTCAGGCAGCGATTTATTAGATGAAGATGGTGATGAATGTGGTAGTTTAGCAGAGTTCAGCGGTCCACCTCTTGAAGTGCAGTACTCATTTAGTAATTTCTCATTTAAGAACTTGTCTCAGCTAGCTTCTATCAATTATGATCTGGTGATTAAGAGCTCCAAGGAATCAACTCAATGA 3531 0.4177 MSSTTPPLKPDQCDPVPGTPSSPAGRGKLQKIPPIPIRRSKVSSSSTTTHAGNADEEQEEDSSSILLASSLGLNHIRTRSSSFPLRYSSSLGAPSFLTQDAVTVNDARLRSKSNNSHPRKVLALLGGKVHLGKSKTLRPHSQLIPGLEGHHAAFTKEMQSPRFQEILRLTSGRKKRNPDIKSFSHELNSKGVRPFPIWKHRAFGHMEEVMAAIRFKFEKLKEEVDSDLGGFAGDLVGILEKNLVADREWKERLEDLLVVTQQCAKMTPTQFWIKCESIVQNLDDKRQELPVGILKQTHTRLLFILTRCTRLVQFQKESGYEQDHILGLHQFSDLGVYPEQIFKAVQQKSSIPSAGHEMPEKQLKMSHGKEKDKPITEQSQADQHVSVAIDNEEVATAKSIESTPGTYKMSSWRKLPSAGEKKRKDQDAVDFPSKGELDHLLVKDENCENLDTLSCHPEHSQSSSRARKVSWGFWGDQQNLTYEDSMICRICEVEIPIVHVEEHSRICTIADRCDLKGLTVNERLERVSETIERILESWTPKSTPKSTDTSGESFELAAVSTSSVHEEFNDLSLERNNLTCRCSEDMLDSGVEPDNTFAMEDLNLSSGISCEAHICLKTDHGTKLSSAGSLTPRSPLITPRTTQIEILLSGRRTLSELESCDQISKLVEIARAVANVNNCDYRALEYMLDRLEDLKYAIQDRKVDALIVETFGRRIEKLLQEKYLSLCGQIEDEKVDSSTSMADEESSVEDDTVRSLRASPINACSKDRTSIEDFEIIKPISRGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVQSILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSILRNLGCLDEDMARVYIAEVVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLINSTDDLSAPSFSDNGFLGDDEPKSRHSSKREERQKQSVVGTPDYLAPEILLGMGHGATADWWSVGVILYELLVGIPPFNAEHPQQIFDNIINRDIQWPKIPEEISFEAYDLINKLLNENPVQRLGATGATEVKRHAFFKDINWDTLARQKAMFIPMAEALDTSYFMSRYIWNPEDEHCLGGSDFDEITETCSSGSGSDLLDEDGDECGSLAEFSGPPLEVQYSFSNFSFKNLSQLASINYDLVIKSSKESTQ* 1177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0036 1176 MobiDBLite consensus disorder prediction 935 962 - -
Gso12g0036 1176 MobiDBLite consensus disorder prediction 942 961 - -
Gso12g0036 1176 Gene3D Phosphorylase Kinase; domain 1 772 1089 - -
Gso12g0036 1176 MobiDBLite consensus disorder prediction 415 430 - -
Gso12g0036 1176 ProSitePatterns Serine/Threonine protein kinases active-site signature. 893 905 IPR008271 GO:0004672|GO:0006468
Gso12g0036 1176 ProSiteProfiles Protein kinase domain profile. 774 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g0036 1176 CDD STKc_MAST_like 780 1067 - -
Gso12g0036 1176 PANTHER SERINE/THREONINE-PROTEIN KINASE 25 1175 - -
Gso12g0036 1176 SUPERFAMILY Protein kinase-like (PK-like) 771 1091 IPR011009 -
Gso12g0036 1176 MobiDBLite consensus disorder prediction 1 63 - -
Gso12g0036 1176 ProSiteProfiles AGC-kinase C-terminal domain profile. 1063 1163 IPR000961 GO:0004674|GO:0005524|GO:0006468
Gso12g0036 1176 SMART serkin_6 774 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g0036 1176 Pfam Protein kinase domain 774 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso12g0036 1176 PANTHER SERINE/THREONINE PROTEIN KINASE IRE-RELATED 25 1175 - -
Gso12g0036 1176 Gene3D Transferase(Phosphotransferase) domain 1 858 1080 - -
Gso12g0036 1176 MobiDBLite consensus disorder prediction 396 430 - -
Gso12g0036 1176 MobiDBLite consensus disorder prediction 396 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0036 Gso-Chr12 322124 330189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0036 29 1176 AGC Kinase Gene Family AT5G62310 63.419 0.0 1436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Gso12g0036 Pkinase 2.2e-65 CL0016