Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0016 ATGGCTCATTTACTGGCGAGCAACCCCAATGCTTCACAGAAACTTACCTTCTCAAACTTGGGGTATTATGGTGTTAGAAGAGGATCCAGAACCAAAGGTTCGTGTTACAGAGTGGGAAGGAAAAGGCGAGGTGGTTTGGTGTTGCAATGCAGCAGCACAACTGATCAGGATGTGAGGTTGCAGATTGAGAGTGGTAGCATCGGAAAGCTTAAGCAGCATTTTGAATATTTGGTGTGTGAATATGGGTGGAGAGTAAGAAGACTATTTGAAAACGCAGATGAGATAAAGAAGGCATCTCATGTTCAGGCCGAAGCATTCCATGTTCCTGTCTCTCTTTTCAACGAATTGTTCTTCCAATTCTTTCAGGCGGAAGTGCTTTCGGGGCTTCTTTACAAGCTTAAAAACTCACCTCCTAATAGGTATGCTTGTTTGGTAGCTGAGCCAGCAATAAACGATCCAGATTCACCAAAACAACTTGTAGGTGTCATAGATGTCACTGTCTTACGAGACCAGAACGTGCTCCAGCATCTTCCTCCCGAAGCTGAAGAGTACCTTTACATATCAGGAATAGCCGTCTCCAAAACTTTCAGGAGGAAGAAAATAGCGACCGCACTGTTAAAAGCCTGTGAAATGCTTTCCATTTTGTGGGGTTTTGAGTTTCTTGCCCTCCGAGCTTATGAAGAAGATCTAGGTGCTCGCAAATTGTACGCAAATGCTGGGTACCAAGTTGTGTCTCGAGATCCTCCATGGACAAGTAATTGGATTGGAAGGAAATGTCGTGTTCTTATGATCAAAAGAACTAGTTTGCCCAAATAG 816 0.4387 MAHLLASNPNASQKLTFSNLGYYGVRRGSRTKGSCYRVGRKRRGGLVLQCSSTTDQDVRLQIESGSIGKLKQHFEYLVCEYGWRVRRLFENADEIKKASHVQAEAFHVPVSLFNELFFQFFQAEVLSGLLYKLKNSPPNRYACLVAEPAINDPDSPKQLVGVIDVTVLRDQNVLQHLPPEAEEYLYISGIAVSKTFRRKKIATALLKACEMLSILWGFEFLALRAYEEDLGARKLYANAGYQVVSRDPPWTSNWIGRKCRVLMIKRTSLPK* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0016 271 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 93 268 IPR000182 GO:0016407
Gso12g0016 271 CDD NAT_SF 158 223 - -
Gso12g0016 271 Gene3D - 90 266 - -
Gso12g0016 271 Pfam Acetyltransferase (GNAT) family 137 241 IPR000182 GO:0016407
Gso12g0016 271 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 34 269 - -
Gso12g0016 271 PANTHER N-ALPHA-ACETYLTRANSFERASE 34 269 - -
Gso12g0016 271 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 94 265 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0016 Gso-Chr12 156079 158056 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gso12g0016 Acetyltransf_1 6.8e-09 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0016 - - gmx:100800276 540.806