Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3790 ATGATATTGTGCAGATTTAAGTCAAGTGCATCAAGTAGCATATCAAAGGGGGCACCGGACTTTTGTAACGTGTCTGTCATTTCAAAGGGCAAAGTCTCTTCAGTTCGGAAGGCTACTCGCCCAACCTCACATACATCACCACTTCTAAGCCATATACATGATCTAAATAACCGGGGCAAAAATCAACATGAGATATCCTCCAGACCTATGAATTTGGGAGACAGGACATCAATCAAACCTCACGGCTGGCTGGATGAATCTATTAAGTCTCCATTTGTAAGAGGAAGAGGCATGGATGGAATGTCATGCATGGACTTCCCAGAATCAGATACAGACATATCATTTGTAAGCTCCGAGAGGCCAAGCAGTGCACGTTCATCCTCCGTTTATGACTACATTGACGTAGGCCGAACTTCTCGAGTTTCTACCAATTCAGATCGTAGCTTCGGATCAACCCGATTGGGGGCTCTCAAGTTCAACAACCCCAATTCACCAGATACGTCATTCTCACATGAAAGCAGTGCAACATCATTTTCATATTCATTACAGAGCGAGGATGAAGCAGCAGAAGCTGATATGAGGAGGCTGAAGCTCGAGTTAAAGCAAACGATCAAAATGTACAGTACAGCATGCAGACAAGCACTTGCATCACAGCATAAGTTAATGGAGTTGACCCACTTGAGACTTGAGGAAGAAAAAAAAATACAAGAGGCACGATTGGCACAGGAAGCTGCAATGGCAATTGCAGAGAAAGAGAAAGCAAGATGTAGAGTAGCCATGGAAACTGCTGAAGCATCTAAGAAAATTGCAGAGGTGGAAACACATAGAAGAGCGGGTGTTGAAGTTAAAGCTCTTAAAGAAGCAGAAGAAAAGAGGAAGCTATTGGACAATCTAGCCCTAACTGATGTAAGATATAGGAGATATTGTGTAGAGGAGATTGAAGCAGCCACAAACTACTTTTCTGAGCTCCAGAGAATTGGGGAAGGAGGTTATGGCCCTGTTTATAAATGTTATCTTGATCACACTCCAGTTGCTGTCAAGGTTCTACGTCCAGATGCTGCTCAAGGGAAGTCACAGTTTCAGCAAGAGATTGACATATTAAGCTGCATGAGACACCCAAACATGGTGCTTCTTCTAGGAGCATGTCCGGAGTATGGCATATTGATTTATGAATATATGGCTAATGGAAGCTTAGAAGATTGTCTGTTTAAAAAAAAGAACAAGCGTGTTCTGTCTTGGCAGCTGAGGTTCCGAATTGCTGCAGAGATAGGGACGGGCTTACTATTCCTGCATCAGGCCAAGCCTGAACCTTTAGTGCACCGTGATCTGAAACCAGGGAACATTTTGCTAGACCAGAATTATGTGAGTAAGATAAGTGATGTTGGATTGGCAAGGCTTGTCCCGGCTGTAGCTGAAAATGTAACACAATGCTGCATGACATCAGCAGCTGGAACATTTTGTTATATTGATCCCGAGTATCAGCAAACAGGAATGCTTGGTGTGAAGTCGGATGTTTATTCTTTGGGGATCATATTTCTACAATTATTGACAGGAAGGGCTCCAATTGGATTGGCTCACCATGCTGAAGAGTCTATAGAGAAGGATACCTTCGTGGAAATGCTGGACCCATCTGTTACTGACTGGCCTCTTGAACAAGCCTTGTGCCTTGCAAAAATAGCAGTCAAGTGTGCGGAACTCAGGCGAAAAGATAGGCCAGACCTTGCCAAACTAGTATTGCCAGAGCTAGATAAATTGAGAGACTTTGCTGAACAAAACATGACCATGACCATGCCCATCATTTTAGGATGCACTACGCCTTCACCCAGCCACAGTGAAGCTTCCATGCAACAGGATGTGATCAGTGACCTGCAGCTTGCACATTCCGAAAGCTCATCAGCTCCATCAACGCCCACAGAAGGAAAACCTTAA 1929 0.4401 MILCRFKSSASSSISKGAPDFCNVSVISKGKVSSVRKATRPTSHTSPLLSHIHDLNNRGKNQHEISSRPMNLGDRTSIKPHGWLDESIKSPFVRGRGMDGMSCMDFPESDTDISFVSSERPSSARSSSVYDYIDVGRTSRVSTNSDRSFGSTRLGALKFNNPNSPDTSFSHESSATSFSYSLQSEDEAAEADMRRLKLELKQTIKMYSTACRQALASQHKLMELTHLRLEEEKKIQEARLAQEAAMAIAEKEKARCRVAMETAEASKKIAEVETHRRAGVEVKALKEAEEKRKLLDNLALTDVRYRRYCVEEIEAATNYFSELQRIGEGGYGPVYKCYLDHTPVAVKVLRPDAAQGKSQFQQEIDILSCMRHPNMVLLLGACPEYGILIYEYMANGSLEDCLFKKKNKRVLSWQLRFRIAAEIGTGLLFLHQAKPEPLVHRDLKPGNILLDQNYVSKISDVGLARLVPAVAENVTQCCMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIIFLQLLTGRAPIGLAHHAEESIEKDTFVEMLDPSVTDWPLEQALCLAKIAVKCAELRRKDRPDLAKLVLPELDKLRDFAEQNMTMTMPIILGCTTPSPSHSEASMQQDVISDLQLAHSESSSAPSTPTEGKP* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3790 642 PANTHER OS02G0152300 PROTEIN 3 626 - -
Gso11g3790 642 ProSiteProfiles Protein kinase domain profile. 320 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3790 642 SMART serkin_6 320 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3790 642 SUPERFAMILY Protein kinase-like (PK-like) 304 578 IPR011009 -
Gso11g3790 642 Gene3D Transferase(Phosphotransferase) domain 1 393 601 - -
Gso11g3790 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 438 450 IPR008271 GO:0004672|GO:0006468
Gso11g3790 642 PANTHER BNAA05G18880D PROTEIN 3 626 - -
Gso11g3790 642 Gene3D Phosphorylase Kinase; domain 1 300 392 - -
Gso11g3790 642 Pfam Protein kinase domain 321 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3790 Gso-Chr11 53505420 53508871 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3790 5 615 Receptor kinase-like Gene Family AT1G78940 56.550 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Gso11g3790 Pkinase 5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3790 - - gsj:114376387 1196.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0007 15 72046 74311 Gso11g3790 11 53505420 53508871 GST