Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3782 ATGATGGGTTCCGTTCTAGAGGACAAGATAGACCGTCATAGTTTTCACGACCACCACGACGCCGACGATACTCCCTTAGCATCTTCCTCTTCTAAAGTCCTCCAACAATTACACAGCTTCGATTTTGAGGACACAAGCGTTGTAGATTTGCGGAGCTCATCCATCTTTAACACAACACGTATCAGCAGGAGTATATACGTCGTCTTAATTAAAGCCAAGATCAACCTCTTGCTTCCCTTTGGTCCATTGGCCATTCTCCTACATTATCTAACTGGACACCATGGATGGGTCTTTTTCTTCACCTTATTGGGGATTACTCCTTTGGCAGAACGCCTCGGTTATGCTACCGAGCAGCTTGCCTTCTACACAGGACCCACAGTTGGGGGTCTGCTTAATGCCACATTCGGCAATGCAACTGAAATGATTATATCAATTTATGCATTGGAAAGCAATATGATAAGGGTTGTTCAGCAATCTTTACTCGGTTCAATCTTGTCAAATATGCTTCTAGTTCTTGGCTGTGCATTCTTTACTGGTGGCATTGTCCACTACAAAAAAGTGCAGGTTTTTGATAAGGCAGCTGCTGTTGTCAATTCTGGGTTACTCTTGATGGCTGTAATGGGAATACTATTTCCTGCTGTGCTTTACTTTACTCACTCCGAAGTTCATCAAGGGAAGTCAGTCTTATCTCTTTCAAGATTTAGCAGCTGCATAATGCTACTGGCCTATGCAAGCTACCTTTTCTTTCAACTTAGAAGTCAGCAAAATGTTTATAGTCCAGTTGACGAGGAAGGAGATAATGGTGAAAATTCTGATGAGGAGGAAGAACATGAATTAACTCAATGGGAGGCAATAATCTGGCTTGCTATCTTGACAGCATGGGTATCTATATTGTCTGGATACCTTGTAGACGCCATACAGGGAGCATCTGAGTCATTGAATATGTCAGTGGCTTTTATTTCTGTCATCTTGCTTCCAATTGTAGGCAATGCTGCAGAACATGCCAGTGCTATCATGTTTGCCGTGAAGGACAAGCTTGATATCACTATTGGAGTTGCTATTGGATCGTCTACACAGATATCTATGTTTGTGATCCCTTTCTGTGTAGTTGTTGGATGGTGCATGGGAAAAGAAATGGACTTGAATTTTCAACTATTCGAGACTGCCACGCTTTTTATCACTGTGTTAGTAGTTGCATTTATGATGCAGGAAGGAACCTCAAATTATTTTAAAGGGTTGATGCTTATTCTATGCTATCTAATAGTTGCTGCCAGTTTTTTCGTACATGTAGACCCTAAAAGTGGTGATGACTAA 1314 0.4163 MMGSVLEDKIDRHSFHDHHDADDTPLASSSSKVLQQLHSFDFEDTSVVDLRSSSIFNTTRISRSIYVVLIKAKINLLLPFGPLAILLHYLTGHHGWVFFFTLLGITPLAERLGYATEQLAFYTGPTVGGLLNATFGNATEMIISIYALESNMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHYKKVQVFDKAAAVVNSGLLLMAVMGILFPAVLYFTHSEVHQGKSVLSLSRFSSCIMLLAYASYLFFQLRSQQNVYSPVDEEGDNGENSDEEEEHELTQWEAIIWLAILTAWVSILSGYLVDAIQGASESLNMSVAFISVILLPIVGNAAEHASAIMFAVKDKLDITIGVAIGSSTQISMFVIPFCVVVGWCMGKEMDLNFQLFETATLFITVLVVAFMMQEGTSNYFKGLMLILCYLIVAASFFVHVDPKSGDD* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3782 437 Pfam Sodium/calcium exchanger protein 96 251 IPR004837 GO:0016021|GO:0055085
Gso11g3782 437 Pfam Sodium/calcium exchanger protein 285 424 IPR004837 GO:0016021|GO:0055085
Gso11g3782 437 PANTHER VACUOLAR CATION/PROTON EXCHANGER 24 434 - -
Gso11g3782 437 TIGRFAM cax: calcium/proton exchanger 77 427 IPR004798 GO:0006816|GO:0015369
Gso11g3782 437 TIGRFAM caca2: calcium/proton exchanger 67 427 - -
Gso11g3782 437 Gene3D - 272 428 IPR044880 -
Gso11g3782 437 Gene3D - 125 261 IPR044880 -
Gso11g3782 437 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 24 434 IPR004713 GO:0006812|GO:0008324|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3782 Gso-Chr11 53400186 53409453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3782 63 432 Antiporters AT3G13320 77.089 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3782 K07300 - gmx:100806000 832.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0016 15 183073 189536 Gso11g3782 11 53400186 53409453 GST