Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3773 ATGGTTTTCTTACAAACCCTGTTGTTCTTCCTTTTACTTGTTGTAACAACATTTGGTCAGTCCATAACTCCAAGGCGGCACCATCCCCACCCTTCTCATTCTTTGCTCACAGATAAAGCTGCCCTTCTGGAATTCAGAAAAACAATCATATCAGACCCGCATTCCTCACTTGCTAACTGGGATGAAGCTGTTCATGTGTGCAACTTCACGGGTGTTGTATGTGACAAATTCCATAACCGTGTCACACGACTAATCCTGTACGATAAAGGTCTAGTGGGGCTGCTTTCACCCGTTCTTTCCAATCTCACTGGACTGCACTACCTTGAGATTGTTCGCAGTCACTTATTTGGCATTATTCCACCTGAATTTTCCAACCTCAGACGCCTTCACAGCATCACTCTCGAGGGGAACAATTTGCATGGCTCAATACCAGAGTCCTTTTCCATGCTTTCCAAGCTTTACTTTTTTATCATTAAGGAAAATAACATATCAGGTTCACTTCCTCCATCTCTCTTTTCCAACTGCACTCTGCTAGACGTTGTGGACTTTTCTAGCAACTCATTAACTGGCCAAATCCCAGAAGAGATTGGAAACTGCAAAAGCCTGTGGAGTATCAGTTTATACGATAATCAATTTACTGGGCAACTTCCTCTCTCGCTGACCAATCTAACGCTTCAAAATTTAGACGTGGAGTACAATTATCTGTTTGGTGAATTGCCTACAAAGTTTGTAAGCAGCTGGCCAAATCTTCTTTACCTTCATTTATCATACAACAATATGATAAGCCATGATAACAACACCAATCTTGATCCATTTTTCACTGCTCTCAGAAACAACAGTAATCTAGAGGAGCTTGAATTGGCAGGAATGGGCCTTGGGGGAAGGTTCACGTACACTGTCGCCGGCCAACTCACCAGTCTAAGAACCCTGCTCCTGCAAGAAAACCAAATTTTTGGATCAATTCCTCGTAGCTTAGCAAACCTTTCAAGGCTTTTCATTCTGAATTTAACATCCAATCTTCTAAATGGGACTATATCCTCTGATATCTTCTTTAGCTTGCCAAAGTTGGAACAACTTTCCTTATCACACAACCTTTTCAAAACTCCAATTCCAGAAGCAATAGGCAAGTGTCTTGATCTGGGTCTACTGGACCTGTCATACAATCAATTCTCAGGTAGGATTCCAGACAGTTTGGGAAATTTGGTTGGACTAAATTCTTTGTTTCTCAACAATAACCTTCTCTCAGGAACAATACCTCCCACATTGGGACGGTGTACTAATCTGTACAGGCTTGACTTGTCCCATAATAGATTAACAGGAAGCATACCACTGGAACTGGCAGGCTTGCATGAGATCAGAATTTTCATAAATGTCTCTCATAACCACCTTGAAGGTCCTCTTCCAATTGAGCTCAGCAAATTAGCGAAGGTTCAGGAGATAGATCTTTCATCCAATTACCTAACTGGAAGTATCTTCCCTCAGATGGCAGGATGCATTGCTGTTTCAATGATTAACTTTTCAAACAATTTTCTTCAAGGTGAGCTCCCACAGTCCCTTGGTGATCTGAAGAACCTCGAATCTTTTGATGTTTCAAGAAACCAGTTATCTGGATTGATACCAGCAACACTTGGAAATCCACAACTTTGTGGGACAATTGCAGGCATATCCTTGTGCTCTCAAAGAAGAAAATGGTTTCACACTCGTTCGTTGTTGATTATATTCATTTTGGTCATCTTCATATCAACATTGTTGTCAATAATTTGCTGTGTAATTGGATGCAAGCGTCTTAAAGTAATCATCAGCTCTCAGAGGACAGAGGCAAGCAAAAATGCAACTAGACCTGAGTTGATTAGTAACTTCCCAAGAATCACGTATAAGGAACTTTCAGATGCCACTGGAGGATTTGACAATCAGAGACTTGTTGGATCAGGTAGTTATGGACATGTCTACAGGGGTGTTCTCACGGATGGGACACCAATAGCAGTCAAGGTGCTGCATTTGCAATCTGGAAATTCTACCAAGAGCTTTAACAGAGAATGTCAAGTTTTGAAGAGAATTAGACACAGAAATCTGATAAGGATTATCACAGCATGTAGCCTACCTGATTTTAAGGCTCTTGTTCTACCATACATGGCCAATGGGAGCTTGGAGAGCCGCCTCTACCCTTCTTGCGGATCATCAGACTTGAGTATTGTCCAGAGGGTGAATATTTGCAGTGATGTAGCTGAAGGGATGGCCTATTTGCATCACCATTCTCCTGTTAGAGTCATACATTGTGATCTTAAACCAAGCAATATTCTTCTCAATGATGACATGACAGCTCTCGTTTCTGATTTTGGGGTTGCAAGGCTAATTATGAGTGTTGGAGGTGGGGCTATTGATAACATGGGCAACTCTAGTGCAAATTTGTTCTGTGGATCCATTGGATACATTGCACCAGAATATGGATTTGGATCCAATACATCTACCAAAGGAGATGTCTATAGCTTTGGCATTCTAGTTCTCGAGATGGTGACTAGAAGAAGACCAACAGATGACATGTTTGTTGGTGGGTTAAGTCTGCACCAATGGGTAAAGATTCATTTTCATGGAAGGGTAGAAAAGGTGATAGATTCTGCTTTGGTGACAGCCTCAATAGATCAATCCCGAGAGGTTAGAAAGATGTGGGAAGCTGCTATTGTCGAGTTAATTGAGTTGGGGCTTCTTTGCACACAGGAGTCACCTTCGACAAGACCAACCATGCTTGATGCAGCAGATGACTTAAATCGTCTCAAGAGATACCTTAATGGGGACACAACAGGAACTTTTGCCTCATCACTTGGAATTTCATCTTCCACTGTAGGTGGTGACTGGTGA 2856 0.4184 MVFLQTLLFFLLLVVTTFGQSITPRRHHPHPSHSLLTDKAALLEFRKTIISDPHSSLANWDEAVHVCNFTGVVCDKFHNRVTRLILYDKGLVGLLSPVLSNLTGLHYLEIVRSHLFGIIPPEFSNLRRLHSITLEGNNLHGSIPESFSMLSKLYFFIIKENNISGSLPPSLFSNCTLLDVVDFSSNSLTGQIPEEIGNCKSLWSISLYDNQFTGQLPLSLTNLTLQNLDVEYNYLFGELPTKFVSSWPNLLYLHLSYNNMISHDNNTNLDPFFTALRNNSNLEELELAGMGLGGRFTYTVAGQLTSLRTLLLQENQIFGSIPRSLANLSRLFILNLTSNLLNGTISSDIFFSLPKLEQLSLSHNLFKTPIPEAIGKCLDLGLLDLSYNQFSGRIPDSLGNLVGLNSLFLNNNLLSGTIPPTLGRCTNLYRLDLSHNRLTGSIPLELAGLHEIRIFINVSHNHLEGPLPIELSKLAKVQEIDLSSNYLTGSIFPQMAGCIAVSMINFSNNFLQGELPQSLGDLKNLESFDVSRNQLSGLIPATLGNPQLCGTIAGISLCSQRRKWFHTRSLLIIFILVIFISTLLSIICCVIGCKRLKVIISSQRTEASKNATRPELISNFPRITYKELSDATGGFDNQRLVGSGSYGHVYRGVLTDGTPIAVKVLHLQSGNSTKSFNRECQVLKRIRHRNLIRIITACSLPDFKALVLPYMANGSLESRLYPSCGSSDLSIVQRVNICSDVAEGMAYLHHHSPVRVIHCDLKPSNILLNDDMTALVSDFGVARLIMSVGGGAIDNMGNSSANLFCGSIGYIAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFVGGLSLHQWVKIHFHGRVEKVIDSALVTASIDQSREVRKMWEAAIVELIELGLLCTQESPSTRPTMLDAADDLNRLKRYLNGDTTGTFASSLGISSSTVGGDW* 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3773 951 SUPERFAMILY L domain-like 325 545 - -
Gso11g3773 951 Pfam Leucine rich repeat N-terminal domain 37 75 IPR013210 -
Gso11g3773 951 SUPERFAMILY Protein kinase-like (PK-like) 612 921 IPR011009 -
Gso11g3773 951 ProSitePatterns Protein kinases ATP-binding region signature. 641 663 IPR017441 GO:0005524
Gso11g3773 951 SUPERFAMILY L domain-like 64 370 - -
Gso11g3773 951 Gene3D Ribonuclease Inhibitor 225 564 IPR032675 -
Gso11g3773 951 SMART LRR_typ_2 522 545 IPR003591 -
Gso11g3773 951 SMART LRR_typ_2 150 174 IPR003591 -
Gso11g3773 951 SMART LRR_typ_2 126 149 IPR003591 -
Gso11g3773 951 SMART LRR_typ_2 401 425 IPR003591 -
Gso11g3773 951 SMART LRR_typ_2 328 352 IPR003591 -
Gso11g3773 951 SMART LRR_typ_2 353 377 IPR003591 -
Gso11g3773 951 SMART LRR_typ_2 304 327 IPR003591 -
Gso11g3773 951 ProSiteProfiles Protein kinase domain profile. 635 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3773 951 PANTHER OS06G0186100 PROTEIN 542 930 - -
Gso11g3773 951 PANTHER OS06G0186100 PROTEIN 26 543 - -
Gso11g3773 951 CDD STKc_IRAK 641 924 - -
Gso11g3773 951 Gene3D Transferase(Phosphotransferase) domain 1 711 935 - -
Gso11g3773 951 Gene3D Ribonuclease Inhibitor 154 224 IPR032675 -
Gso11g3773 951 Gene3D Ribonuclease Inhibitor 37 153 IPR032675 -
Gso11g3773 951 Pfam Leucine rich repeat 306 365 IPR001611 GO:0005515
Gso11g3773 951 SMART serkin_6 635 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3773 951 PANTHER OS04G0122200 PROTEIN 26 543 - -
Gso11g3773 951 PANTHER OS04G0122200 PROTEIN 542 930 - -
Gso11g3773 951 Gene3D Phosphorylase Kinase; domain 1 616 710 - -
Gso11g3773 951 ProSitePatterns Serine/Threonine protein kinases active-site signature. 756 768 IPR008271 GO:0004672|GO:0006468
Gso11g3773 951 ProSiteProfiles Leucine-rich repeat profile. 427 450 IPR001611 GO:0005515
Gso11g3773 951 Pfam Protein kinase domain 636 917 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3773 Gso-Chr11 53329276 53333192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3773 37 911 Receptor kinase-like Gene Family AT3G47570 33.505 1.49e-149 467
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Gso11g3773 Pkinase 3.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3773 - - gmx:100815766 1806.19