Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3768 ATGCCTTCAAGACCCTTCCCTCCCACAAATCCCACCAAAACCAAGGCCCTCTTCCTAGCACTCACCATCTCAGCTTGTGTTGTGATTTTCTGCTCAATCCTCTACTTCCTCTACCATCTGTGGCATTCTCTTGTTCACAGAGCTAAGACCATCCCCTTTGATGCAAGTGCTCCCTTGAAGCTCCAAAGATTCTCATACAAAGATTTAAAGCAAGCCACCAATGGCTTTGACACTGCCAATGTAATTGGCAAAGGTGGCTCTGGCACTGTTTTCAGAGGAATACTTAAAGATGGCAAGTTGATTGCCATCAAACGCCTGGACACGTTGTCTTTGCAGTCAGAGAGAGAGTTTCAAAACGAGCTGCAGATTCTTGGAGGGTTGAGGTCACCATTCTTGGTGACCCTCTTGGGTTACTGTGTGGAAAAGAACAAAAGGGTGTTGGTGTATGAGTATATGCCCAACAGAAGCTTGCAGGAGTCACTCTTTGGAGATGATGGGGGGGGTTTGAGTTTGAGTTGGGGGAGCAGGTTTTGCATAATGTTGGATGTTGCTAGAGCTTTGGAGTTCTTGCACCTTGGATGTGATCCTCCAGTGATCCATGGTGATATCAAGCCAAGCAATGTTCTGATTGATTCTGAGTGGCGTGGGAAGATCTCTGACTTTGGCTTGTCAAGGATTAAGGTGGAAGGTGAGTTTGGTGTGGACTTGTTTAGCCAGGACTTGGGGAGGAGCCAGGATCTATGGAAAAGCCAAGAGCTTTCAGGTAATTTGACTGCAGAAACTCCTCCTGCTCTTGGTACTCCAGTTGAAAATGTTAGTGAAGTAGATTTTGCTCTAGCTTTGCAAGCCTCTTCTTCATCTAAAAATAGTAGGACTTGCTTTAATGTCAAAGCTTTGAACTTGAATTCTTTGAATTATAATGCCAATATTGCTACTGAAACTGAAATTAGGAGTGTAAATGCGAAGGGTAAGGAAGTTTCGGCTTTGGATAGGGATGATTGGAATGGTAAGTTTTTCCCTTGTGATGATGAGCTTTCTAGCATTGATTATAGTAAGGAGTTAACTGTGAGTGCTTCTCCTTTGGTGGATGATGAGAAGGCAAATGGGAAACAATGGGGAAAGGACTGGTGGTGGAGACAGGATGGAAGTGGAGAGTTATGTAGTAAAGACTACGTAATGGAGTGGATAGGGAGTCAGATTTGTCCATCCAACGCTGATTGGGATGATGGTAAGAACAATGTTCACACGAAAGTAGAGTTGGAAAATTCAAATCCCAAGGATAAAGACCATGATGCTATTGCACCCCAACCACAGGTGTTTGGGATTGGACATAATACTACAGATAATGGGGTTGAGAAAAAAGAGTCAAGGGGAAAGAAAAATCACAAAAAGAAGCACAGGAAGATGCAAGAGTGGTGGAGAGAAGAGCATCTTGCTGAATTAAGCAAGAAGACCAGTAAACTTAAAAATCTTCATACCAAGTGGAAGAAAGGCTTGAAAGTGCCCCATTTTGATTTGGGTAGAAGGTTTTATCTTTGCAGGCGTAAGAAGTTTGGAGAGGAGGGTGAGAATGAGTGTGATCAAAATGGGGAGTTTAGCTTCAGAAGAGGCTGGAAGAAGAAAAGCACTCATTCCATTGGAAGTGACATGTGGAGTGGAGATCTTTTCAGCCGTGAGCTCAGTAGCACAACAAGCATGAGAGGGACACTGTGTTATGTGGCACCAGAATATGGAGGCTGTGGATTCTTAATGGAGAAAGCTGACATTTATAGTTTTGGAGTTTTGATTCTTGTAATTGTGTCAGGTAGGAGACCATTGCATGTTCTTGCATCACCCATGAAACTAGAGAAAGCTAACTTAATAAGCTGGTGTAGACACTTGGCTCAAGCTGGTAACATTTTAGAACTTGTGGATGAGAGATTGAAAGAAGATTACAAGAAGGAACAAGCAAGTCTGTGTATCAACTTGGCACTCATTTGCTTACAGAAAATTCCAGAGCTGCGGCCAGATATTGGGGATATTGTTAAGATTTTGAAGGGGGAGATGGAGCTTCCACCACTTCCATTTGAATTCTCCCCTTCTCCACCTTCCAAATTATACAGCAGATCAAGGAGAAAACCGAAGGGCACTGCAGAATAG 2139 0.4329 MPSRPFPPTNPTKTKALFLALTISACVVIFCSILYFLYHLWHSLVHRAKTIPFDASAPLKLQRFSYKDLKQATNGFDTANVIGKGGSGTVFRGILKDGKLIAIKRLDTLSLQSEREFQNELQILGGLRSPFLVTLLGYCVEKNKRVLVYEYMPNRSLQESLFGDDGGGLSLSWGSRFCIMLDVARALEFLHLGCDPPVIHGDIKPSNVLIDSEWRGKISDFGLSRIKVEGEFGVDLFSQDLGRSQDLWKSQELSGNLTAETPPALGTPVENVSEVDFALALQASSSSKNSRTCFNVKALNLNSLNYNANIATETEIRSVNAKGKEVSALDRDDWNGKFFPCDDELSSIDYSKELTVSASPLVDDEKANGKQWGKDWWWRQDGSGELCSKDYVMEWIGSQICPSNADWDDGKNNVHTKVELENSNPKDKDHDAIAPQPQVFGIGHNTTDNGVEKKESRGKKNHKKKHRKMQEWWREEHLAELSKKTSKLKNLHTKWKKGLKVPHFDLGRRFYLCRRKKFGEEGENECDQNGEFSFRRGWKKKSTHSIGSDMWSGDLFSRELSSTTSMRGTLCYVAPEYGGCGFLMEKADIYSFGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHLAQAGNILELVDERLKEDYKKEQASLCINLALICLQKIPELRPDIGDIVKILKGEMELPPLPFEFSPSPPSKLYSRSRRKPKGTAE* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3768 712 PANTHER OS08G0275200 PROTEIN 1 711 - -
Gso11g3768 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Gso11g3768 712 MobiDBLite consensus disorder prediction 688 712 - -
Gso11g3768 712 SMART serkin_6 76 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3768 712 ProSitePatterns Protein kinases ATP-binding region signature. 82 104 IPR017441 GO:0005524
Gso11g3768 712 ProSiteProfiles Protein kinase domain profile. 76 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3768 712 Gene3D Phosphorylase Kinase; domain 1 43 151 - -
Gso11g3768 712 Pfam Protein kinase domain 78 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3768 712 PANTHER OS07G0586332 PROTEIN 1 711 IPR044576 -
Gso11g3768 712 SUPERFAMILY Protein kinase-like (PK-like) 56 698 IPR011009 -
Gso11g3768 712 Gene3D Transferase(Phosphotransferase) domain 1 152 268 - -
Gso11g3768 712 Gene3D Transferase(Phosphotransferase) domain 1 536 684 - -
Gso11g3768 712 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Gso11g3768 712 MobiDBLite consensus disorder prediction 437 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3768 Gso-Chr11 53302676 53305614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3768 546 678 Receptor kinase-like Gene Family AT3G58690 31.343 1.22e-13 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Gso11g3768 Pkinase 1.3e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3768 - - gmx:100800845 1406.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0029 15 268103 271169 Gso11g3768 11 53302676 53305614 GST