Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3762 ATGGATTATTCATCATGGATGATTAACACTTCCTTGGATCTCAACATTAATCCCCACAGGCTTCATGAAGAACTTCCCAAAAAGGAGGTGGAAAACAACTTTTTGTCATTGAATTTGGAGGTGAAGAAATCTTCTGTAAAACAAGAGTCTGCTGGTGCCTTGGCGGAGGAGCTGAAGCGGGTGAGTGCAGAAAACAAGAAGTTAACCGAAATGCTCACAGAGATGTGTGAGAATTACAACACTTTGCGAGGCAATTTGATGGAATACATGAGGAAGAATCCGGATAAGGAGCACAGCTCATCAAAGAAAAGGAAGTCTGAAAGCAACAACAATAGTATTCCAATGGGAGTCAACGGAACCTCTGAAAGCAGCTCAACTGATGAAGAATCCTGCAAGAAACCAAAGGAAGACATCAAGACTAAAATTTCAAGAGTTTATATGAGGACAGAAGCATCTGATAAAAGCCTTATTGTGAAAGATGGATATCAATGGAGGAAATATGGACAAAAGGTGACCAGGGATAACCCTTCTCCAAGAGCATATTTCAAGTGCTCTTTTGCTCCAAGCTGCCCGGTCAAAAAGAAGGTGCAAAGAAGTGTGGATGATCAATCTGTTCTGGTTGCAACTTATGAAGGAGAGCACAATCATCCTCACCCTTCTCAAATGGAGGTAACAACAGGCTCCAACCGTTGTATGACTCTTGGTTCAGTACCATGTTCAGCGTCTCTTAGCTCTTCCCCACCAACAGCTACCCTTGACTGGACAAAATCCAAGTCCAGCAGTGAGTCTAAGAATACAAGTCCCAAAACCGAATCACCAGAAGTCCCGCAGGTTTTGGTAGAGCAGATGGCTACTTCCTTGACCAAGGATCCTAATTTCAGAGCAGCACTAGTTGCTGCCATCTCAGGAAAAATGTTGCACAATAATTAA 930 0.428 MDYSSWMINTSLDLNINPHRLHEELPKKEVENNFLSLNLEVKKSSVKQESAGALAEELKRVSAENKKLTEMLTEMCENYNTLRGNLMEYMRKNPDKEHSSSKKRKSESNNNSIPMGVNGTSESSSTDEESCKKPKEDIKTKISRVYMRTEASDKSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVDDQSVLVATYEGEHNHPHPSQMEVTTGSNRCMTLGSVPCSASLSSSPPTATLDWTKSKSSSESKNTSPKTESPEVPQVLVEQMATSLTKDPNFRAALVAAISGKMLHNN* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3762 309 SMART WRKY_cls 158 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso11g3762 309 Gene3D WRKY domain 142 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso11g3762 309 PANTHER TRANSCRIPTION FACTOR 1 309 - -
Gso11g3762 309 SUPERFAMILY WRKY DNA-binding domain 155 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso11g3762 309 ProSiteProfiles WRKY domain profile. 153 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso11g3762 309 MobiDBLite consensus disorder prediction 106 125 - -
Gso11g3762 309 MobiDBLite consensus disorder prediction 240 277 - -
Gso11g3762 309 MobiDBLite consensus disorder prediction 93 136 - -
Gso11g3762 309 Pfam WRKY DNA -binding domain 159 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso11g3762 309 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 309 IPR044810 GO:0003700
Gso11g3762 309 Coils Coil 51 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3762 Gso-Chr11 53258216 53260276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3762 1 309 WRKY Transcription Factor Family AT1G80840 54.601 1.11e-103 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso11g3762 WRKY 2.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3762 - - gmx:100798375 575.859