Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3761 ATGGACCGGCGCACGGGCAGCACCCGTAACATCCTCTTCAACAAGTACGAGATAGGGAAATTGCTGGGACAGGGCAACTTCGCCAAGGTGTACCACGGCAGAAACCTCAGCACAAATGAGAGCGTGGCCATCAAAGTCATAAAAAAAGAGAGGCTTCAGCAGAAAGAGAGGCTCGTCAAACAGATCAAACGCGAGGTCTCCGTCATGAGCCTGGTGCGTCACCCCCACATCGTCGAATTAAAAGAGGTGATGGCCAACAAGGCCAAAATCTTCCTGGTTGTCGAATACGTCAAAGGAGGTGAACTCTTCGCCAAGGTTGCAAAGGGGAAGATGAAGGAAGACGTCGCCAGAAAGTACTTTCAGCAACTCATCAGCGCCGTCGATTTCTGCCACAGCCGCGGCGTCACCCACCGCGATTTGAAGCCGGAGAATCTGCTCCTCGACGAGAACGAAGACCTTAAAGTCTCCGACTTTGGCCTGTCGGCGCTGCCGGACCAGCGCAGATCCGACGGGATGCTCCTGACGCCGTGCGGGACGCCGGCCTACGTGGCGCCGGAGGTTCTGAAGAAGAAGGGGTACGATGGGTCGAAGGCTGATATATGGTCCTGCGGGGTCATCCTCTTTGCTCTTCTTTCTGGCTATTTGCCCTTTCAAGGTGAGAATGTGATGAGAATTTACAGCAAGTCTTTCAGAGCCGATTATGCGTTCCCCGAATGGATTTCCCCTGGGGCTAAAAACTTGATCTCCAATTTACTCGTTGTGGACCCGCAAAAGAGGTATTCCATTCCCGACATCATGAAGGACCCTTGGTTTCAAATTGGGTTCATGAGGCCCATTGCTTTTTCCATGAAGGAGTCTGCGGTTGAAGATAACATTGATTTCAGCGGGGATGATGTTTCCAATGGTAGTGATGATGGCAATAGCAGCAGCAGCAACAACGATGATGGGGAATTGACTGGGGCTAAGCCTGCTCGTCCGTCTTACAACGCTTTTGAGATAATCTCGTCCTTGTCGAATGGGTTCGATCTGAGGAATTTGTTTGAGACGAGGAAGCGGTCGCCGTCCATGTTCATTTCCAAGTTTTCGGCTTCGGCGGTGATGGCGAAGCTGGAGGGGGTGGCGAAGAAGCTGAACTTTAGGGTGACGGGGAAGAAGGAGTTCGTGGTGAGGATGCAGGGGGCGACGGAGGGGAGGAAGGGGAAGCTGGCCATGACGGTCGAGGTATTCGAGGTGGCGCCGGAGGTTGCGGTGGTCGAGTTCGCCAAGTCTGCTGGAGACACGCTTGAATACATTAAATTCTGTGAGGACCAAGTCAGACCTTCTCTCAAAGACATTGTGTGGAGTTGGCAAGGGGACGCTAATTGCCACCAGTAA 1374 0.5291 MDRRTGSTRNILFNKYEIGKLLGQGNFAKVYHGRNLSTNESVAIKVIKKERLQQKERLVKQIKREVSVMSLVRHPHIVELKEVMANKAKIFLVVEYVKGGELFAKVAKGKMKEDVARKYFQQLISAVDFCHSRGVTHRDLKPENLLLDENEDLKVSDFGLSALPDQRRSDGMLLTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILFALLSGYLPFQGENVMRIYSKSFRADYAFPEWISPGAKNLISNLLVVDPQKRYSIPDIMKDPWFQIGFMRPIAFSMKESAVEDNIDFSGDDVSNGSDDGNSSSSNNDDGELTGAKPARPSYNAFEIISSLSNGFDLRNLFETRKRSPSMFISKFSASAVMAKLEGVAKKLNFRVTGKKEFVVRMQGATEGRKGKLAMTVEVFEVAPEVAVVEFAKSAGDTLEYIKFCEDQVRPSLKDIVWSWQGDANCHQ* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3761 457 Pfam NAF domain 327 382 IPR004041 GO:0007165
Gso11g3761 457 CDD CIPK_C 329 443 - -
Gso11g3761 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Gso11g3761 457 SMART serkin_6 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3761 457 MobiDBLite consensus disorder prediction 294 324 - -
Gso11g3761 457 Gene3D Kinase associated domain 1, KA1 324 448 - -
Gso11g3761 457 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
Gso11g3761 457 MobiDBLite consensus disorder prediction 296 317 - -
Gso11g3761 457 Coils Coil 45 65 - -
Gso11g3761 457 Gene3D Transferase(Phosphotransferase) domain 1 7 319 - -
Gso11g3761 457 PANTHER CBL-INTERACTING PROTEIN KINASE 16 7 456 - -
Gso11g3761 457 SUPERFAMILY Protein kinase-like (PK-like) 12 272 IPR011009 -
Gso11g3761 457 Pfam Protein kinase domain 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3761 457 ProSiteProfiles NAF domain profile. 323 348 IPR018451 GO:0007165
Gso11g3761 457 PANTHER - 7 456 - -
Gso11g3761 457 ProSiteProfiles Protein kinase domain profile. 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3761 Gso-Chr11 53236371 53238772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3761 9 454 CBL-interacting serine-threonine protein kinases AT5G10930 60.179 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gso11g3761 Pkinase 7.4e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3761 - - gmx:100797846 847.81