Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3759 ATGCCTTCTTCAGAATCATCAACAGGCTTCTCCGAAACCATTTGTGTGACCGGCGCTGGTGGCTTCATCGCCTCTTGGATGGTCAAACTCCTCTTGGAGAAAGGCTACACTGTCCGAGGAACCCTCAGAAACCCAGATGATCCCAAGAACGGGCACTTAAAAGAGTTTGAAGGAGCTTCCCAGAGACTAACTCTGCATAAGGTTGACCTCCTTCATCTTGACTCCGTTAGATCTGTTATTAACGGCTGTCATGGTGTCTTTCACACTGCTTCTCCCGTCACCGATAACCCCGAAGAAATGGTGGAGCCTGCGGTGAATGGAGCTAAGAATGTGATCATAGCAGCTGCAGAGGCTAAAGTTAGACGCGTGGTGTTCACCTCATCCATTGGTGCCGTTTACATGGACCCCAAAAGGAGCATCGATTTGGTGGTTGACGAGTCCTGTTGGAGTGATTTAGAATTTTGCAAGAACACCAAGAATTGGTATTGCTATGGGAAGGCTGTGGCTGAAGAAGCGGCATGGGACACAGCAAAAGAGAAAGGGGTGGACATGGTTGTAGTGAACCCAGTTTTGGTACTTGGACCATTACTGCAACCCAGCATAAATGCTAGTACAATTCACATCCTCAAGTACCTCACTGGCTCTGCTAAGACCTATGCAAATGCCACACAGGCGTATGTTCATGTTAGGGACGTGGCATTGGCCCACATACTTGTTTATGAGAAGCCTTCTGCCTCTGGTAGATACATATGTGCCGAAAGCTCTCTCCACCGTGGAGAATTAGTTGAAATTCTCGCCAAGTATTTCCCCGACTACCCAGTTCCCACCAAGTGTTCAGATGAAAAGAATCCGAGAGCAAAACCCTACACTTTTTCAAATCAAAAACTGAAAGATTTGGGATTGGAATTCACCCCAGTGAGTCAGTGTTTATATGAAACCGTCAAGAACCTGCAGGAGAAAGGGCACCTTCCTGTTCCTGCAAGGCAGCAGGAAGATTCAACTACTGTGAAACCTTAA 1017 0.472 MPSSESSTGFSETICVTGAGGFIASWMVKLLLEKGYTVRGTLRNPDDPKNGHLKEFEGASQRLTLHKVDLLHLDSVRSVINGCHGVFHTASPVTDNPEEMVEPAVNGAKNVIIAAAEAKVRRVVFTSSIGAVYMDPKRSIDLVVDESCWSDLEFCKNTKNWYCYGKAVAEEAAWDTAKEKGVDMVVVNPVLVLGPLLQPSINASTIHILKYLTGSAKTYANATQAYVHVRDVALAHILVYEKPSASGRYICAESSLHRGELVEILAKYFPDYPVPTKCSDEKNPRAKPYTFSNQKLKDLGLEFTPVSQCLYETVKNLQEKGHLPVPARQQEDSTTVKP* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3759 338 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 327 - -
Gso11g3759 338 CDD FR_SDR_e 15 301 - -
Gso11g3759 338 Gene3D - 5 338 - -
Gso11g3759 338 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 9 327 - -
Gso11g3759 338 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 12 317 IPR036291 -
Gso11g3759 338 Pfam NAD dependent epimerase/dehydratase family 14 245 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3759 Gso-Chr11 53206090 53208712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3759 14 277 Monolignol Biosynthesis Gene Families AT1G80820 74.621 1.48e-143 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3759 K09753 - gmx:100796771 672.159