Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3742 ATGTCTCACAGAAAGGATAATAATAATTATTCTTCCTTACCCATTAACTCGTATCTAGAATTGCAGCCTCAAAATGATTCCTCAAAATCCTTACAAAGGCCCACTTTTGACGAATCCGAGGTGTATTTGGGATCCAAGGTCGATGACGACGACGATGACGATTTGGAAATCGACATCGATAATTATCCCCTTATTGTTATGGGGCCCAATCACGGTTCTGGGATACCTGGGGCTGTTTTCAATTTAACAACCACTGTTATCGGGGCAGGGATTATGGCCCTCCCTGCCACTATGAAAGTTCTAGGTGTGGTTTTGGGGATTGTTTTGATCGTTCTTATGGGAATTTTGTCTGAAATTAGCGTCGAATTGTTGGTGAGGTTTTCTGTTTTGTGTAAGGCATCCTCCTATGGTGAGGTTGTTCAACATGCTATGGGAAGGCCTGCCAGGATTTTGTCTGAAATTTGTATCATTGTCAACAATGCTGGTGTTTTGGTGGTTTACTTGATAATCATGGGGGATGTTATGTCTGGTTCCGTCCACCATTTGGGGGTTTTTGATCAGTTAATGGGGAATGGGGTGTGGGATCAGAGGAAGCTTGTCATTTTTGTTGTCATGGTGGTTTTCCTTGCCCCCCTTTGTTCACTTGACAAGATTGATTCCTTGAGCTTGACCTCGGCCGCCTCGGTGGCTCTTGCTGTCTTGTTTGTCATTGTTACTTTTACTGTTGCTTTCATTAAGCTCGTGGAAGGACGGATTGATGCTCCCAGGATGGCTCCTGATTTTAGCTCCAAAACTGCCATCTTGGATTTGCTTGTCGTGATTCCCATCATGACCAATGCATATGTTTGTCATTTTAATTTGCAGCCGATATATAACGAGCTTGAACAGCGGTCTCCTCAGAAGATGAACCGAGTTGGAAGGTACACCACGATTTTGTGCATCCTAGTTTATTCTTCCACTGCCATATCGGGTTACCTGCTCTTTGGGAAAGATACTGAGTCTGATGTGCTGACTAATTTTGATAAAGATCTTGGAATTCGGTTTAGCTCGGCCTTGAACTATATTGTCCGGGTTGGCTACATTCTTCATTTGATACTTGTTTTCCCTGTTATTCATTTCTCGCTGCGCCAAACAGTGGATGCGCTAGTGTTTGAGGGATCACCTCCCCTATCAGAAAGTAGGAAGAGATCTCTGGGGTTGACTGTGGTTCTGTTGGTCCTCATATATATTGGCTCTACCATGATTCCAAGCATATGGACAGCTTTTAAGTTCACTGGAGCAACCACGGCTGTTTCATTGGGCTTTATATTTCCTTCTCTTGTTGCATTGAGATTAAGTCATCAGGGGGACTTAAGCTATGGGGAATGGATTTTATCTTGGTTGATGTTGGTATTAGCTGTGACTGTTAGTGTAGTAGGAGTTGTTGGCAATATCTATAGCCTTGAGAGTAACTCTTAG 1458 0.4328 MSHRKDNNNYSSLPINSYLELQPQNDSSKSLQRPTFDESEVYLGSKVDDDDDDDLEIDIDNYPLIVMGPNHGSGIPGAVFNLTTTVIGAGIMALPATMKVLGVVLGIVLIVLMGILSEISVELLVRFSVLCKASSYGEVVQHAMGRPARILSEICIIVNNAGVLVVYLIIMGDVMSGSVHHLGVFDQLMGNGVWDQRKLVIFVVMVVFLAPLCSLDKIDSLSLTSAASVALAVLFVIVTFTVAFIKLVEGRIDAPRMAPDFSSKTAILDLLVVIPIMTNAYVCHFNLQPIYNELEQRSPQKMNRVGRYTTILCILVYSSTAISGYLLFGKDTESDVLTNFDKDLGIRFSSALNYIVRVGYILHLILVFPVIHFSLRQTVDALVFEGSPPLSESRKRSLGLTVVLLVLIYIGSTMIPSIWTAFKFTGATTAVSLGFIFPSLVALRLSHQGDLSYGEWILSWLMLVLAVTVSVVGVVGNIYSLESNS* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3742 485 Pfam Transmembrane amino acid transporter protein 73 476 IPR013057 -
Gso11g3742 485 PANTHER AMINO ACID TRANSPORTER AVT6E 48 484 - -
Gso11g3742 485 PANTHER AMINO ACID TRANSPORTER 48 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3742 Gso-Chr11 52987831 52989785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3742 7 485 Amino Acid or Auxin Permease AAAP Family AT1G80510 71.633 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3742 - - gmx:100791860 878.626