Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3731 ATGGCACTTACAACACTCTCTCTGCTCCCACCCTCCACTCCTCCCTGCTTCTGCGGCACCCTCCATCTCCGCTCCCACAACAGCTTCCTTTCCATCCATTCTCCTTCTTCTTCTTCTCCCTTTCCTTCCTTCTCCTCAATTTCAATTCCCAACCACTCTCCCACGCGCCGCCGCTTTCACACTGTCTTCGCCGCTTCCTCCGACTACTATTCCACTCTCGGAATCCCCAAATCCGCCACCGGCAAGGAAATCAAAGCCGCCTATCGAAGGTTAGCTCGCCAGTACCATCCTGACGTGAATAAGGAGCCCGGGGCAACTGAAAAGTTCAAAGAGATTAGTGCTGCCTATGAGGTGCTATCAGATGATAAAAAGAGGGCCTTATATGATCAATATGGCGAGGCAGGAGTTAAGAGTGCAGTCGGAGGAGGGTCAAGTGCCTATACGACAAATCCATTTGATTTATTTGAGACATTTTTTGGGCCAAGCATGGGTGGCTTTGGTGGCATGGATCCAACTGGATTTGGAACTCGTCGTCGTAGTACCGTTACTAAGGGTGAAGACATTCGGTATGATTTTTCCTTAGAGTTTTCTGAGGCAATTTTTGGAACAGAGAAAGAATTTGAGCTTTCTCATTTGGAAACATGTGAAGTCTGTACTGGTACTGGAGCAAAGATAGGCTCCAAGATGAGAGTATGTTCAACTTGTGGTGGGAGAGGTCAAGTGATGAGGACTGAACAAACACCTTTTGGGTTGTTCTCACAGGTTTCAGTATGTCCCAACTGTGGAGGGGATGGTGAAGTCATATCTGAATATTGCCGTAAATGCAATGGTGAAGGACGAATACGGGTTAATAAAAATATTAAAGTTAAAGTTCCTCCTGGTGTTAGCTCAGGCAGTATTCTAAGAGTTACAGGGGAGGGTGACGCTGGACCAAGAGGGGGCCCTCCAGGAGATCTGTACGTATATCTTGATGTGCAAGTGATACCTGGAATTCAAAGAGATGACATTAATCTCGTCTCAATAATATCAATCAGTTATCTAGATGCTATACTGGGGGCTGTTGTGAAGGTAAAGACAGTTGAAGGCATTTCAGAACTACAAGTACCTGCTGGTACCCAACCTGGAGATGTCCTTGTCCTTGCAAGAAAAGGTGTACCAAAATTAAATAAACCATCAATACGTGGTGACCACTTATTTACAGTTAAAGTTACAATACCAAAAAGGATTAGTACAAAGGAGCGTGAGTTGCTTGAAGAACTTGCTTCTCTAGGTGACACAAGCAGACGTTCAAAATCCCGTCCTAGGACTCACTCTTCCACAGGTGGTACGGAAAGTCCGAAAGCTCAAAAGGATGAAAGTACAACATCAACAGTCGAAGAAAAAACTGAAAAATCAGAAGATGAAAATGATGTATGGAATAAATTGAAGGACTTTGCTGGATCTGTGGCAAATGGAGCTTTAAAGTGGTTTAAAGATAATCTCTAG 1485 0.4458 MALTTLSLLPPSTPPCFCGTLHLRSHNSFLSIHSPSSSSPFPSFSSISIPNHSPTRRRFHTVFAASSDYYSTLGIPKSATGKEIKAAYRRLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRALYDQYGEAGVKSAVGGGSSAYTTNPFDLFETFFGPSMGGFGGMDPTGFGTRRRSTVTKGEDIRYDFSLEFSEAIFGTEKEFELSHLETCEVCTGTGAKIGSKMRVCSTCGGRGQVMRTEQTPFGLFSQVSVCPNCGGDGEVISEYCRKCNGEGRIRVNKNIKVKVPPGVSSGSILRVTGEGDAGPRGGPPGDLYVYLDVQVIPGIQRDDINLVSIISISYLDAILGAVVKVKTVEGISELQVPAGTQPGDVLVLARKGVPKLNKPSIRGDHLFTVKVTIPKRISTKERELLEELASLGDTSRRSKSRPRTHSSTGGTESPKAQKDESTTSTVEEKTEKSEDENDVWNKLKDFAGSVANGALKWFKDNL* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3731 494 CDD DnaJ 68 121 IPR001623 -
Gso11g3731 494 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Gso11g3731 494 ProSiteProfiles dnaJ domain profile. 68 132 IPR001623 -
Gso11g3731 494 Hamap Chaperone protein DnaJ [dnaJ]. 65 478 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Gso11g3731 494 MobiDBLite consensus disorder prediction 436 452 - -
Gso11g3731 494 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 202 282 IPR036410 -
Gso11g3731 494 Pfam DnaJ central domain 215 279 IPR001305 GO:0031072|GO:0051082
Gso11g3731 494 PRINTS DnaJ domain signature 70 88 IPR001623 -
Gso11g3731 494 PRINTS DnaJ domain signature 88 103 IPR001623 -
Gso11g3731 494 PRINTS DnaJ domain signature 104 124 IPR001623 -
Gso11g3731 494 PRINTS DnaJ domain signature 124 143 IPR001623 -
Gso11g3731 494 Gene3D - 185 321 - -
Gso11g3731 494 Gene3D DnaJ domain 65 169 IPR036869 -
Gso11g3731 494 PANTHER MOLECULAR CHAPERONE HSP40/DNAJ FAMILY PROTEIN 56 433 - -
Gso11g3731 494 MobiDBLite consensus disorder prediction 453 472 - -
Gso11g3731 494 SMART dnaj_3 67 124 IPR001623 -
Gso11g3731 494 Gene3D - 331 423 - -
Gso11g3731 494 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 56 433 - -
Gso11g3731 494 Pfam DnaJ C terminal domain 188 406 IPR002939 -
Gso11g3731 494 Gene3D - 215 279 - -
Gso11g3731 494 CDD DnaJ_C 186 409 - -
Gso11g3731 494 ProSiteProfiles Zinc finger CR-type profile. 202 284 IPR001305 GO:0031072|GO:0051082
Gso11g3731 494 MobiDBLite consensus disorder prediction 421 472 - -
Gso11g3731 494 CDD DnaJ_zf 215 279 IPR001305 GO:0031072|GO:0051082
Gso11g3731 494 Pfam DnaJ domain 68 129 IPR001623 -
Gso11g3731 494 SUPERFAMILY HSP40/DnaJ peptide-binding domain 183 337 IPR008971 GO:0006457|GO:0051082
Gso11g3731 494 SUPERFAMILY HSP40/DnaJ peptide-binding domain 332 417 IPR008971 GO:0006457|GO:0051082
Gso11g3731 494 TIGRFAM DnaJ_bact: chaperone protein DnaJ 68 422 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Gso11g3731 494 SUPERFAMILY Chaperone J-domain 64 174 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3731 Gso-Chr11 52896812 52904614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3731 69 175 C2H2 Transcription Factor Family AT1G74250 38.596 9.61e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3731 K03686 - gmx:100798567 871.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0066 15 561039 569831 Gso11g3731 11 52896812 52904614 GST