Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3723 ATGGGCATATTCAGATGTGGGACCTTGTTTTTCCATGTGCTCCTTTTGTTTAGAACCTGTCTGGCCAAAGATCAACATGTTAGTCAGATATATCCTGGCTTCAGTGCATCTCAGCCAGATTGGAGCGACCATAATGGTTTTTTCTTGCTATCCAACAGCTCAGCTTTCGCTTTTGGATTCTTCACTACTCTTGATGTTTCATCGTTTGTTTTAGTTGTCATGCACTTAAGCAGCTACAAAGTGGTTTGGACTGCCAACAGAGGCTTACTCGTTGGGACTTCTGATAAATTTGTGCTTGACCATGATGGGAATGCATATTTGGAAGGTGGGAATGGTGTAGTTTGGGCAACAAATACAAGAGGACAAAAAATAAGATCCATGGAATTGCTTAACTCAGGGAATTTGGTGTTGCTTGGGGAAAATGGGACAACTATTTGGCAAAGTTTTAGCCATCCCACTGATACTCTTTTGCCCGGACAAGACTTTGTGGAAGGAATGACACTCAAAAGCTTCCACAACAGCTTGAACATGTGTCATTTTCTTAGTTACAAGGCAGGTGATTTAGTTCTCTATGCAGGATTTGAAACTCCACAAGTGTACTGGTCCCTATCAGGAGAACAAGCTCAGGGAAGCTCAAAAAATAACACTGGTAAGGTTCACTCAGCGTCTTTGGTGTCCAATTCATTGAGTTTTTATGACATAAGTAGAGCTTTGCTATGGAAAGTTGTCTTCTCTGAGGACTCAGATCCCAAGTCATTGTGGGCTGCTACCTTGGATCCAACTGGTGCAATCACTTTTTATGATCTCAACAAAGGGAGGGCTCCTAACCCTGAGGCAGTTAAGGTACCACAAGACCCTTGTGGCATTCCTCAGCCTTGTGATCCTTATTATGTTTGCTTCTTTGAAAACTGGTGCATCTGCCCGAAACTTCTCAGGACTCGCTATAATTGCAAACCTCCCAACATCTCCACCTGTTCTAGGAGTTCAACGGAACTTTTATATGTTGGTGAAGAGCTTGATTATTTTGCTCTCAAGTACACTGCTCCGGTTTCCAAATCAAACCTGAATGCTTGCAAAGAGACTTGTTTAGGAAACTGTTCATGCCTTGTGCTTTTCTTTGAAAACAGTACCGGAAGATGCTTTCATTTTGATCAGACTGGGAGTTTCCAACGCTATAAGAGGGGTGCAGGTGCTGGTGGTTATGTTTCGTTCATGAAGGTCTCCATTAGTAGTGCTAGTGATGATGGACATGGCAACAAAAATGGAAGGAATGACATGGTGCTAGTTGTTGTCATAGTTCTCACAGTTCTGGTTATAGTTGGTCTTATAACAGGATTCTGGTACTTATTCAAGAGGAAGAAGAATGTTGCTAAGTATCCTCAAGATGACTTGGATGAAGATGATGATTTCTTGGACAGTCTCTCTGGAATGCCTGCACGTTTTACTTTTGCTGCTCTTTGTAGAGCAACTAAGGACTTTTCTTCAAAAATTGGGGAAGGAGGGTTTGGCTCAGTGTATCTAGGTGTGCTTGAAGATGGCACTCAGTTGGCTGTGAAAAAATTGGAAGGTGTTGGACAAGGTGCAAAAGAGTTTAAAGCAGAAGTGTCCATAATTGGAAGTATTCATCATGTTCATCTTGTCAAGCTCAAAGGGTTTTGTGCCGAGGGTCCTCATCGCCTTCTTGTCTATGAATACATGGCAAGGGGTTCTTTGGACAAATGGATCTTCAAGAACAGTGAGAACACCTTCTTGTTGAACTGGGACACAAGGTACAACATTGCAATAGGCACGGCTAAGGGATTGGCCTATCTCCATGAGGAGTGTGATGTGAGGATTATCCACTGTGATATTAAGCCGCAAAATGTTCTTCTTGACGATAATTTCACTGCTAAGGTTTCAGATTTTGGATTGGCCAAGCTAATGAGCCGTGAGCAAAGCCATGTGTTCACAACTCTAAGGGGTACAAGAGGGTATCTAGCACCAGAATGGATAACTAACTACGCAATTTCGGAGAAGAGTGATGTGTTCAGCTATGGCATGCTCTTGCTCGAGATAATTGGAGGGAGGAAGAACTATGATCAATGGGAAGGGGCAGAGAAAGCACATTTTCCTTCTTATGTGTTCAGAATGATGGATGAAGGGAAACTGAAAGAGGTTCTTGATCCAAAGATAGATATTGATGAGAAGGATGAAAGGGTTGAGTCTGCTCTTAAAATTGCTCTTTGGTGCATACAAGATGACGTGAGTTTGAGGCCTTCCATGACTAAGGTGGCTCAGATGCTTGATGGTTTGTGCCCTGTACCTGATCCCCCCTCATTATCTCAATCTGGTACTTATTCAGCTTTCATGAAATTGAGTAGTGGAGAAGCTACTTCATCGGGACAGGCTAGTTTTTTTAGTAATGTACCCATGTCATGTGTTCAATTATCAGGACCAAGATGA 2442 0.4251 MGIFRCGTLFFHVLLLFRTCLAKDQHVSQIYPGFSASQPDWSDHNGFFLLSNSSAFAFGFFTTLDVSSFVLVVMHLSSYKVVWTANRGLLVGTSDKFVLDHDGNAYLEGGNGVVWATNTRGQKIRSMELLNSGNLVLLGENGTTIWQSFSHPTDTLLPGQDFVEGMTLKSFHNSLNMCHFLSYKAGDLVLYAGFETPQVYWSLSGEQAQGSSKNNTGKVHSASLVSNSLSFYDISRALLWKVVFSEDSDPKSLWAATLDPTGAITFYDLNKGRAPNPEAVKVPQDPCGIPQPCDPYYVCFFENWCICPKLLRTRYNCKPPNISTCSRSSTELLYVGEELDYFALKYTAPVSKSNLNACKETCLGNCSCLVLFFENSTGRCFHFDQTGSFQRYKRGAGAGGYVSFMKVSISSASDDGHGNKNGRNDMVLVVVIVLTVLVIVGLITGFWYLFKRKKNVAKYPQDDLDEDDDFLDSLSGMPARFTFAALCRATKDFSSKIGEGGFGSVYLGVLEDGTQLAVKKLEGVGQGAKEFKAEVSIIGSIHHVHLVKLKGFCAEGPHRLLVYEYMARGSLDKWIFKNSENTFLLNWDTRYNIAIGTAKGLAYLHEECDVRIIHCDIKPQNVLLDDNFTAKVSDFGLAKLMSREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVFSYGMLLLEIIGGRKNYDQWEGAEKAHFPSYVFRMMDEGKLKEVLDPKIDIDEKDERVESALKIALWCIQDDVSLRPSMTKVAQMLDGLCPVPDPPSLSQSGTYSAFMKLSSGEATSSGQASFFSNVPMSCVQLSGPR* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3723 813 ProSiteProfiles Bulb-type lectin domain profile. 34 150 IPR001480 -
Gso11g3723 813 Pfam D-mannose binding lectin 81 162 IPR001480 -
Gso11g3723 813 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 203 IPR036426 -
Gso11g3723 813 SMART serkin_6 491 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3723 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Gso11g3723 813 Gene3D Phosphorylase Kinase; domain 1 462 565 - -
Gso11g3723 813 ProSiteProfiles PAN/Apple domain profile. 325 396 IPR003609 -
Gso11g3723 813 Gene3D Transferase(Phosphotransferase) domain 1 566 764 - -
Gso11g3723 813 SUPERFAMILY Protein kinase-like (PK-like) 475 761 IPR011009 -
Gso11g3723 813 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 2 813 - -
Gso11g3723 813 SMART blect_4 40 152 IPR001480 -
Gso11g3723 813 PIRSF SRK 3 810 IPR024171 GO:0004674
Gso11g3723 813 Pfam Protein kinase domain 494 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3723 813 Gene3D - 39 151 IPR036426 -
Gso11g3723 813 CDD STKc_IRAK 497 764 - -
Gso11g3723 813 ProSitePatterns Protein kinases ATP-binding region signature. 497 520 IPR017441 GO:0005524
Gso11g3723 813 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 2 813 - -
Gso11g3723 813 ProSiteProfiles Protein kinase domain profile. 491 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3723 813 CDD B_lectin 45 152 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3723 Gso-Chr11 52820360 52823401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3723 432 771 Receptor kinase-like Gene Family AT5G20050 44.847 1.31e-91 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gso11g3723 Pkinase 8.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3723 - - gmx:100786024 1622.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0075 15 636069 639206 Gso11g3723 11 52820360 52823401 GST