Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3675 ATGGGTGTGAACTCCAACAGAGTGGAACACTTTGCTAGCCATGATAGCGCCATCGAGGAGACAATGCAAATCCATGCAGTGCAGTTGCCACCACACCAGACCACACTCCACAAACTCAGGCACAGAGTCTCCGAAATCTTCTTCCCAGATGACCCTCTCCACCGTTTCAAGAACCAAACTCGCTTTAAAAAGTTCCTCCTCGCACTTCAGTATCTCTTCCCCATTTTCCACTGGGCCCCAAACTACAATCTTACCCTTCTCCGCTCTGACCTCATCTCTGGCCTCACCATTGCCAGCCTCGCCATTCCTCAGGGAATCAGTTATGCCAAGCTTGCCAACTTGCCACCTATTCTTGGATTATATTCGAGTTTTGTTCCCCCATTGATATACTCGCTGCTTGGAAGTTCTAGACATCTTGGTGTTGGACCTGTTTCCATTGCGTCTTTGGTCATGGGATCAATGTTAAGTGATAAAATTTCTTACACTCAAGAACCTATTCTCTATCTGGGATTGGCTTTCACCGCCACTTTCTTTGCTGGTGTATTCCAAGCTTCTCTGGGTATATTAAGGCTAGGCTTCGTAATTGATTTTCTGTCGAAGGCAACGCTGGTTGGATTCACAGGCGGTGCTGCCATTATTGTGTCACTGCAGCAGCTGAAAGGTTTACTTGGAATAGTGCACTTTACCAGCAAGATGCAAATAATTCCAGTAACGATCTCTGTTTTCAAGCAAAGACACGAGTGGTCATGGCAAACCATTCTTTTGGGATTCGGCTTCCTGGTCTTCTTGCTGACAACAAGGCACATTAGTTTGAGGAAACCAAAACTATTCTGGGTTTCAGCAGCTGCCCCATTGACATCAGTTATTCTGTCAACCATTTTAGTCTTTCTTCTGAGAAATAAGACTCATCAAATTTCAGTTATTGGGCACTTACCAAAGGGAGTTAATCCACCATCAGCAAACATGTTATACTTCAATGGTCCTTACTTGGCTCTTGCTATCAAAACTGGCATCATCACAGGGATCTTATCTCTCACTGAAGGAATTGCAGTAGGGAGAACATTTGCTTCACTTAAGAACTACCAGGTGGATGGAAATAAAGAAATGATGGCCATTGGTCTAATGAACATAGCTGGCTCTTGTTCTTCATGTTATGTTACAACGGGATCCTTTTCTCGATCGGCTGTTAACTATAATGCTGGAGCACAGACAACAGTTTCAAATATAATCATGGCTGCAGCTGTTCTAGTGACACTTCTGTTTCTCATGCCTCTTTTCTACTATACACCAAATGTTGTCTTAGCGGCCATTATCATCACTGCTGTGATTGGTCTAATAGATTATCAATCTGCATATAAATTGTGGAAGGTTGACAAACTTGATTTCTTGGCCTGTTTGTGCTCCTTTTTTGGGGTTCTGTTCATTTCAGTGCCTTTAGGTCTTGGTATAGCGGTTATCATATCAGTCCTCAAGATCCTGCTTCATGTCACTCGACCAAACACTTTGGTTTTGGGGAATATACCAGGAACACAAATATTCCACAACATAAACCAATACAAAAAAGCTTTAAGAGTTCCTTCATTTCTCATTTTGGCTGTTGAGTCTCCAATCTATTTTGCTAACTCAACTTATCTTCAAGAAAGGATACTGAGATGGGTTCGAGAAGAGGAAGAGCATATAAAAGCTAATAATGGAGCTCCATTGAAGTGCATAATTTTAGACATGACAGCTGTCACAGCCACAGACACAAGTGGGCTTGACACTTTATGTGAACTTAGAAAGATGCTGGAGAAGAGATCACTTGAGTTTGTGCTGGCAAATCCTGTTGGAAATGTGATGGAAAAATTGCATAAGTCAAACATTTTGGATTCTTTTGGATTAAAAGGAGTCTATCTCACAGTGGGAGAAGCTGTGACTGACATTTCATCAATCTGGAAAGCTCAGCCTTGA 1950 0.4231 MGVNSNRVEHFASHDSAIEETMQIHAVQLPPHQTTLHKLRHRVSEIFFPDDPLHRFKNQTRFKKFLLALQYLFPIFHWAPNYNLTLLRSDLISGLTIASLAIPQGISYAKLANLPPILGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLSDKISYTQEPILYLGLAFTATFFAGVFQASLGILRLGFVIDFLSKATLVGFTGGAAIIVSLQQLKGLLGIVHFTSKMQIIPVTISVFKQRHEWSWQTILLGFGFLVFLLTTRHISLRKPKLFWVSAAAPLTSVILSTILVFLLRNKTHQISVIGHLPKGVNPPSANMLYFNGPYLALAIKTGIITGILSLTEGIAVGRTFASLKNYQVDGNKEMMAIGLMNIAGSCSSCYVTTGSFSRSAVNYNAGAQTTVSNIIMAAAVLVTLLFLMPLFYYTPNVVLAAIIITAVIGLIDYQSAYKLWKVDKLDFLACLCSFFGVLFISVPLGLGIAVIISVLKILLHVTRPNTLVLGNIPGTQIFHNINQYKKALRVPSFLILAVESPIYFANSTYLQERILRWVREEEEHIKANNGAPLKCIILDMTAVTATDTSGLDTLCELRKMLEKRSLEFVLANPVGNVMEKLHKSNILDSFGLKGVYLTVGEAVTDISSIWKAQP* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3675 649 SUPERFAMILY SpoIIaa-like 524 639 IPR036513 -
Gso11g3675 649 ProSitePatterns SLC26A transporters signature. 116 137 IPR018045 GO:0008271|GO:0008272
Gso11g3675 649 CDD STAS_SulP_like_sulfate_transporter 519 634 - -
Gso11g3675 649 Pfam Sulfate permease family 87 466 IPR011547 GO:0016021
Gso11g3675 649 PANTHER SLC26A/SULP TRANSPORTER-RELATED 20 649 - -
Gso11g3675 649 Pfam STAS domain 519 637 IPR002645 -
Gso11g3675 649 Gene3D STAS domain 498 642 IPR036513 -
Gso11g3675 649 ProSiteProfiles STAS domain profile. 518 641 IPR002645 -
Gso11g3675 649 PANTHER SULFATE TRANSPORTER 20 649 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gso11g3675 649 TIGRFAM sulP: sulfate permease 74 637 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3675 Gso-Chr11 52377192 52382386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3675 1 649 Inorganic Solute Cotransporters AT3G15990 76.110 0.0 1031
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3675 K17471 - gmx:100815251 1254.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0129 15 1138935 1144388 Gso11g3675 11 52377192 52382386 GST
Gso11g3675 11 52377192 52382386 Gso8g1721 8 16795745 16800069 PCT
Gso8g1721 8 16795745 16800069 Gso11g3675 11 52377192 52382386 PCT