Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3665 ATGGAAAAGGAGGGCAACGTACTCTGGTATACTGATACTGTTGAATTGAATAGTAGTAGTGTAGCAAGGGGCATGGCTTTGGTGGAGAGGGTTCAAGTTCGAATTCCTCTCCTGTTATTATTAACACTAACACCAACGGCTGTAGCTGTAGGCTTTCGGTGTTGGGAAAGGACCACGTGTCCAGCGTTGCTTGGTTACAAGTCACCAGTCCCAACCACCATAGGGGCCATTCAGAGACTCTTCAACGTCACTGGCGTCGCAGACATTCTCGCCGCTAACAACCTCCCTGAGTGGACCCTACCAAACAATTTCACGGTGGAGGAGAATCGCCTTTTACGGATTCCCTTGGAGTGCGATTGCAGTGGGCCTGGGTTGTACGGAGAGCCCTCTAACCCCCTCGTTTACACTGTGCGGAAGGGTGACAATATTTCTTATCTAGCAACCACTGTGTTCTCCGGTTTGGTGGCTTCAACGGATATCCAACATGGGAACAACGTGACCAATTTAAGGACGGGACAAGAACTGCGAGTGCCACTACCTTGTAGCTGTGGGAAGGTCAACGGGCTTGACGTTCTCCATTTTGGATTGACGCTGGAATACGGGAGCACTACCTTGGAACAGATAGCTCATGAGTACCATGTCTCTTCACAAACCATTACAACTTCCAACCAACCTCATCTTATGTTTGGTCGGGCTTTGGATATTCCACTCCCAGTTTGTTCCTCGATGGTCAGAAAAGACTCTTTGGACCACCCTTTACTTGTTCCAAATGGTTCTTATGTCTACACCGCAAATGGCTGTGTGAAATGCTACTGTGATGCTACCAAAAATTGGAAATTAACATGTGAGCCATCCAAGCTTAGACCAACTAATTGGTCTACTTGCCCATCCATGAAATGTGACAGTTCAATTTCAAGCAACATGTATATTGGTGACACCACATATTCAAGTTCTCACAATCTTGCAATTTGTGCCTACGCTGGTTATGGAACTCAAACTATCTTCACTACTCTAACAGCAGTGTATATTCCTCCTGGTTTAGTGCACGCGCATCACACGAAAAGCAGATGGTGGGCCTGGCTTATTGTGATAGCAGGAGTTTTTGTTGTACTTATATTCGGCTACTTGTGCTGCATCATCTGGAGAAAATGCAAAATAGAAGCTGACAGAAAAAAGAAGCAGAAGGAACTACTATTAGAAATTGGAGTCAGTTCTGTGGCTTGCATTGTGTATCACAAAACAAAAAGACACAGAAAACGTAGCAAGGTCAACTATGAAATGCAAATATTTAGCTTTCCAATCATTGCTGCTGCAACAGGCAACTTTTCAGTTGCAAACAAGTTAGGGCAGGGTGGTTTTGGACCAGTTTACAAGGGAGTACTTCCTGATGGACAAGAAATAGCAATAAAGAGACTTTCTAGTAGATCGGGGCAAGGGTTGGTGGAGTTTAAGAATGAGGCTGAACTGGTAGCAAAATTGCAGCATACTAATCTTGTAAGGCTTTCGGGGCTCTGCATACAAAATGAAGAAAACATATTAATCTACGAGTACTTGCCCAACAAAAGTTTAGACTTTCATCTCTTTGATTCTAAAAGAAGGGAAAAAATAGTTTGGGAGAAAAGATTCAACATCATTGAAGGTATAGCTCATGGGTTGATTTATCTTCATCATTTTTCAAGATTAAAAGTGATTCACCGCGATTTGAAGGCAGGTAACATATTACTTGATTATGAAATGAACCCAAAAATTAGTGATTTTGGCATGGCAGTAATATTGGATTCAGAAGTAGTAGAAGTGAAAACAAAAAGAGTTGTTGGAACATATGGTTACATGTCTCCTGAGTACGTCATAAAAGGCATTATCTCAACAAAGACTGATGTGTTTAGCTATGGAGTCCTAGTGCTTGAGATTGTAAGTGGGAAGAAAAATAATTCTCGCTATCAGGCTGATTACCCCCTCAACCTTATTGGATTTGCATGGCAACTATGGAATGAAGGTAAAGGTGTTGAGTTGATAGATTCATCAATGCTTGAATCATGCCGGACAGCTGAAGTATTGCGATGCACTCAGGTTGCCCTGTTATGTGTACAGGCCAATGCAGCAGATAGACCAAGCATGTTAGAAGTTTATTCAATGCTTGCAAATGAAACTCTCTTCCTCCCTGTCCCTAAACAGCCTGCATATTTTACTGACGCATGTGCAAATGAAAAGAATGCATTAGTAGGAAACGGAAAATCTTATTCTACAAATGAAGTGACAATTTCAATGATGGATGCGAGATAA 2283 0.4231 MEKEGNVLWYTDTVELNSSSVARGMALVERVQVRIPLLLLLTLTPTAVAVGFRCWERTTCPALLGYKSPVPTTIGAIQRLFNVTGVADILAANNLPEWTLPNNFTVEENRLLRIPLECDCSGPGLYGEPSNPLVYTVRKGDNISYLATTVFSGLVASTDIQHGNNVTNLRTGQELRVPLPCSCGKVNGLDVLHFGLTLEYGSTTLEQIAHEYHVSSQTITTSNQPHLMFGRALDIPLPVCSSMVRKDSLDHPLLVPNGSYVYTANGCVKCYCDATKNWKLTCEPSKLRPTNWSTCPSMKCDSSISSNMYIGDTTYSSSHNLAICAYAGYGTQTIFTTLTAVYIPPGLVHAHHTKSRWWAWLIVIAGVFVVLIFGYLCCIIWRKCKIEADRKKKQKELLLEIGVSSVACIVYHKTKRHRKRSKVNYEMQIFSFPIIAAATGNFSVANKLGQGGFGPVYKGVLPDGQEIAIKRLSSRSGQGLVEFKNEAELVAKLQHTNLVRLSGLCIQNEENILIYEYLPNKSLDFHLFDSKRREKIVWEKRFNIIEGIAHGLIYLHHFSRLKVIHRDLKAGNILLDYEMNPKISDFGMAVILDSEVVEVKTKRVVGTYGYMSPEYVIKGIISTKTDVFSYGVLVLEIVSGKKNNSRYQADYPLNLIGFAWQLWNEGKGVELIDSSMLESCRTAEVLRCTQVALLCVQANAADRPSMLEVYSMLANETLFLPVPKQPAYFTDACANEKNALVGNGKSYSTNEVTISMMDAR* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3665 760 Gene3D Transferase(Phosphotransferase) domain 1 518 718 - -
Gso11g3665 760 PANTHER OS01G0783800 PROTEIN 300 732 - -
Gso11g3665 760 SUPERFAMILY Protein kinase-like (PK-like) 424 729 IPR011009 -
Gso11g3665 760 SMART serkin_6 442 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3665 760 Gene3D Phosphorylase Kinase; domain 1 404 517 - -
Gso11g3665 760 ProSitePatterns Serine/Threonine protein kinases active-site signature. 563 575 IPR008271 GO:0004672|GO:0006468
Gso11g3665 760 CDD STKc_IRAK 448 713 - -
Gso11g3665 760 Pfam Protein tyrosine and serine/threonine kinase 444 712 IPR001245 GO:0004672|GO:0006468
Gso11g3665 760 Pfam LysM domain 135 178 IPR018392 -
Gso11g3665 760 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 300 732 - -
Gso11g3665 760 ProSiteProfiles Protein kinase domain profile. 442 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3665 Gso-Chr11 52316526 52321312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3665 339 746 Receptor kinase-like Gene Family AT4G05200 44.769 4.32e-115 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso11g3665 PK_Tyr_Ser-Thr 1.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3665 - - gmx:100811504 1536.55