Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3660 ATGGGGAAGGGAACAGGGAGCTTCGGTAAGAGGAGGAACAAGACCCACACTCTCTGTGTGAGGTGTGGCCGCCGCAGCTTCCACCTCCAGAAGAGTCGCTGCGCCGCTTGTGCTTTCCCCGCCGCACGCACGCGGAAATATAACTGGAGCGTCAAGGCAATTCGCAGAAAGACCACCGGAACTGGCAGGATGAGATACTTGCGTAACGTGCCTCGCCGTTTCAAGAGTGGCTTCAGAGAAGGTACCGAAGCTGCACCAAGGAAGAAGGGAGCAGCTACCACTGCATAG 288 0.5729 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARTRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRKKGAATTA* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3660 95 Pfam Ribosomal protein L37e 3 53 IPR001569 GO:0003735|GO:0005840|GO:0006412
Gso11g3660 95 Gene3D - 1 87 IPR011331 GO:0003735|GO:0005840|GO:0006412
Gso11g3660 95 Hamap 50S ribosomal protein L37e [rpl37e]. 2 53 IPR001569 GO:0003735|GO:0005840|GO:0006412
Gso11g3660 95 PANTHER RIBOSOMAL PROTEIN L37 1 95 - -
Gso11g3660 95 PANTHER 60S RIBOSOMAL PROTEIN L37 1 95 - -
Gso11g3660 95 ProSitePatterns Ribosomal protein L37e signature. 4 23 IPR018267 GO:0003735|GO:0005840|GO:0006412
Gso11g3660 95 SUPERFAMILY Zn-binding ribosomal proteins 1 55 IPR011332 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3660 Gso-Chr11 52265190 52266169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3660 1 95 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 86.316 1.81e-57 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3660 K02922 - gmx:100809899 200.29