Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3644 ATGGCTGGCATAGCATTCGGAAGCTTCAATGATTCTGTCAGTTTTGCCTCCATCAAGGCCTACATTGCTGAGTTCATCTCAACCCTTCTCTTTGTTTTTGCCGGTGTTGGTTCAGCCATAGCCTATGCTAAGTTGACATCAGATGCAGCTCTTGATCCAACTGGGTTGGTAGCCGTTGCTATTTGCCATGGTTTTGCTCTCTTCGTTGCTGTTTCTGTTGGAGCCAACATTTCTGGTGGCCATGTGAACCCTGCTGTGACCTTTGGGTTGGCTCTTGGGGGCCACATCACCATCCTCACTGGTCTCTTCTACTGGATTGCACAGCTTCTCGGCTCCATAGTGGCATCCTTACTCCTCAAGTTTGTCACTGGCTATGATACTCCTATCCACAGTGTTGCTGCGGGAATTGGAGCTGGTGAAGGAGTAGTTACAGAGATCATAATCACATTTGGATTAGTGTACACAGTGTATGCCACAGCAGCAGACCCTAAGAAGGGTTCGTTGGGCACAATTGCACCCATTGCCATTGGTTTCATTGTTGGCGCCAACATCTTAGCAGCAGGGCCATTCTCTGGCGGGTCCATGAACCCTGCACGCTCCTTTGGCCCTGCTGTTGTCAGTGGTGACTTTCATGACAACTGGATTTACTGGGTTGGCCCTCTTATTGGTGGTGGTTTGGCTGGTCTTATCTATACCTATGCCTTCATCCCCACCAACCATGCACCTCTCGCTACTGAATTTTGA 744 0.4933 MAGIAFGSFNDSVSFASIKAYIAEFISTLLFVFAGVGSAIAYAKLTSDAALDPTGLVAVAICHGFALFVAVSVGANISGGHVNPAVTFGLALGGHITILTGLFYWIAQLLGSIVASLLLKFVTGYDTPIHSVAAGIGAGEGVVTEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFHDNWIYWVGPLIGGGLAGLIYTYAFIPTNHAPLATEF* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3644 247 SUPERFAMILY Aquaporin-like 15 242 IPR023271 -
Gso11g3644 247 Gene3D Glycerol uptake facilitator protein. 2 244 IPR023271 -
Gso11g3644 247 PANTHER AQUAPORIN-8 1 247 IPR034294 -
Gso11g3644 247 TIGRFAM MIP: MIP family channel proteins 23 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso11g3644 247 CDD MIP 19 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso11g3644 247 Pfam Major intrinsic protein 14 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso11g3644 247 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso11g3644 247 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso11g3644 247 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso11g3644 247 PRINTS Major intrinsic protein family signature 144 162 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso11g3644 247 PRINTS Major intrinsic protein family signature 177 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso11g3644 247 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso11g3644 247 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Gso11g3644 247 PANTHER MIP PROTEIN 1 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3644 Gso-Chr11 52139648 52141072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3644 1 245 Major Intrinsic Protein MIP AT3G16240 79.352 2.84e-134 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3644 K09873 - gmx:100805635 466.463