Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3640 ATGGCATCCCGTTTGTTCGTCCTTTCTACTTGTGTGATCATTTTCATGGCTGCCACCAATACTTGTGTTGAAGCTTCCGTGCAATTCAAAGTTGGTGGTAGCTTCGGTTGGCATGAACCTGCAGGCACCAACAATACTGATCAACTTTATATTCAATGGGCTGAAAGGAACAGATTTCAAGTTGGTGATGCTCTTGTTTTTGAGTACCAGAATGACTCGGTTCTTAGTGTGGAGAAATTTGATTACATGAATTGCGATGCAAGTAATCCTATCACTGCCTTCGACAATGGGAAGAGCACGTTTAATCTTGACAGGCCAGGGAACTTCTACTTCATCAGTGGAACCGATGATCACTGCAAGAATGGCCAAAAACTACTTGTGGATGTGATGCACCCACATACTGTCCTTAAATCTCCACCACCCATTTCCCTTCCACCAGAAGGGTTTCCACCAATGGCTCCTCCACCTTCTGATGATCAAAGCCTAGAGGCTTCATCAGCCTCAGTGCTTCTTACTTTTATGTTTATGTCTCTTTTCGTCACATCTGTTAGTGTCATGCTGTTGGCATTCTGA 573 0.4398 MASRLFVLSTCVIIFMAATNTCVEASVQFKVGGSFGWHEPAGTNNTDQLYIQWAERNRFQVGDALVFEYQNDSVLSVEKFDYMNCDASNPITAFDNGKSTFNLDRPGNFYFISGTDDHCKNGQKLLVDVMHPHTVLKSPPPISLPPEGFPPMAPPPSDDQSLEASSASVLLTFMFMSLFVTSVSVMLLAF* 191
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3640 190 MobiDBLite consensus disorder prediction 140 157 - -
Gso11g3640 190 CDD OsENODL1_like 28 130 IPR041846 -
Gso11g3640 190 ProSiteProfiles Phytocyanin domain profile. 27 131 IPR003245 GO:0009055
Gso11g3640 190 PANTHER BLUE COPPER PROTEIN 11 178 IPR039391 GO:0009055
Gso11g3640 190 SUPERFAMILY Cupredoxins 26 130 IPR008972 -
Gso11g3640 190 MobiDBLite consensus disorder prediction 140 161 - -
Gso11g3640 190 Gene3D - 26 135 IPR008972 -
Gso11g3640 190 Pfam Plastocyanin-like domain 45 123 IPR003245 GO:0009055
Gso11g3640 190 PANTHER EARLY NODULIN-LIKE PROTEIN 2 11 178 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gso11g3640 Gso-Chr11 52100525 52101718 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3640 9 150 Phytocyanin Superfamily AT1G79800 47.297 1.15e-41 137
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3640 - - gmx:100783893 376.711
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0171 15 1440818 1441920 Gso11g3640 11 52100525 52101718 GST