Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3626 ATGGGCAAAGCTACAAGGTGGTTGAAGGGGTTGTTGGGAAAGAAGAAAGAGAAGGATTACTGTGGCTATTCAGGCTCATTGGATCTTGACAAGAGGGAAAAGAAACGATCGGAGAAGGATGAAGTGAGTCACTTTACTCCAACCAGTGTTACCACCTTTGACCGTACTAGGTTCAGATCCTTTGTTGCCCAAAAAGAGAATGTGAAGAACAAGCACTCCATTGATGTGGCTGTTGTGAGATCAAAAAGCTGTGACAGAGGCACCTTGCTTATTGGAAGCATGCAGGGCTGGGCTGCTGTGTTGATTCAATCCTTTTTCAGAGGTTATTTGGCGCGTAAGGCTCTTAGAGCACTCAAAGGATTGGTTAAGATACAAGCTCTTGTTAGAGGGTATCTAGTTCGAAAAAGGGTTGCAGCAACTCTTCACAGTGTGCAAGCTATGATCAGAGCTCAAGCTGTAGCTCGATCCGCGCGAGCTCGTCGTTCCATGGACAAGGAGAATAGATTTCATCCTCAAACTCCTTCCAGAAAACACGTGCAACGGTTTGATGAAGCAAGAAATTATCAATTACCCAATAGAAGGGTACCTATATGCTGTAAGGCACCCTTTAATAGATTTGATGGGAGTCAAAAAGTTGTTGAGGTTGACACTCACATGCCACATTCAAGAAGTAGGAGCATTAACACTGCAATGTCAGAATGTGGAGAAGACTTGAACTATGAAGCAATGTCATCCTCTCTTGGTTGTCCAGTTCAAGGTCGAATCTCACTTCATGAGAGGCAACACCCTCAAGAGTTTGAATGGCTCTTCAACGTTGATGAAGGTAATAACAAGTTCTCCACAACACACAACACGCCTCGTTTACAAAAATGTATGCTACCAGGTACTCCAGTGAAGAGTGTTTGTGGAGAAACCTTCTTCAGGAATTGCTCCAATTTCCCTAACTACATGGCTAATACTCACTCTTCTAAGGCCAAACTAAGGTCTCACAGTGCTCCAAAGCAAAGGCCTGAACTCAAGAAAAGGCTTTCAATCAATGAAATGATGGCAGCAAGAAATAGTGTTAGTGGTGTGGGAATGCAGTGGTCATCATCCAACCCGAAAACTCAAGAAGATTACTTTTTTTTTGAAAGGGTTATTTAG 1143 0.4322 MGKATRWLKGLLGKKKEKDYCGYSGSLDLDKREKKRSEKDEVSHFTPTSVTTFDRTRFRSFVAQKENVKNKHSIDVAVVRSKSCDRGTLLIGSMQGWAAVLIQSFFRGYLARKALRALKGLVKIQALVRGYLVRKRVAATLHSVQAMIRAQAVARSARARRSMDKENRFHPQTPSRKHVQRFDEARNYQLPNRRVPICCKAPFNRFDGSQKVVEVDTHMPHSRSRSINTAMSECGEDLNYEAMSSSLGCPVQGRISLHERQHPQEFEWLFNVDEGNNKFSTTHNTPRLQKCMLPGTPVKSVCGETFFRNCSNFPNYMANTHSSKAKLRSHSAPKQRPELKKRLSINEMMAARNSVSGVGMQWSSSNPKTQEDYFFFERVI* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3626 380 ProSiteProfiles IQ motif profile. 98 123 IPR000048 GO:0005515
Gso11g3626 380 Pfam Protein of unknown function (DUF4005) 280 356 IPR025064 -
Gso11g3626 380 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 380 - -
Gso11g3626 380 Pfam IQ calmodulin-binding motif 122 136 IPR000048 GO:0005515
Gso11g3626 380 Pfam IQ calmodulin-binding motif 97 116 IPR000048 GO:0005515
Gso11g3626 380 Gene3D - 55 120 - -
Gso11g3626 380 Gene3D - 121 169 - -
Gso11g3626 380 ProSiteProfiles IQ motif profile. 119 146 IPR000048 GO:0005515
Gso11g3626 380 SMART iq_5 117 138 IPR000048 GO:0005515
Gso11g3626 380 SMART iq_5 94 116 IPR000048 GO:0005515
Gso11g3626 380 PANTHER IQ-DOMAIN 5-RELATED 1 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3626 Gso-Chr11 51918012 51921036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3626 1 360 IQD Protein Family AT3G16490 40.447 2.39e-74 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3626 - - gmx:100797296 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0187 15 1611563 1613664 Gso11g3626 11 51918012 51921036 GST
Gso11g3626 11 51918012 51921036 Gso7g0127 7 1177829 1180855 PCT
Gso11g3626 11 51918012 51921036 Gso8g1663 8 16281073 16283445 PCT
Gso7g0127 7 1177829 1180855 Gso11g3626 11 51918012 51921036 PCT
Gso8g1663 8 16281073 16283445 Gso11g3626 11 51918012 51921036 PCT