Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3622 ATGAATATCAATAGCACAGAAGCACTTCTTGTGCTTTTTGCATTTGTCTTCTTGGCATGGGGCAATGCACAAAATACCCTTGTGCCAGCAATCATAACATTTGGTGACTCGGCTGTGGATGTTGGGAACAATGATTATCTGCCTACCCTTTTCAAGGCTAACTACCCTCCTTATGGAAGGGACTTTATCAACCATCAACCCACTGGGAGGTTCTGCAATGGGAAACTAGCTACTGATATTACTGCTGAAACACTGGGTTTTAAGAGTTATGCACCTGCGTATCTTAGCCCTCAGGCATCAGGGAAGAATCTTCTTATTGGAGCAAACTTTGCTTCAGCTGCCTCTGGTTATGATGAAAAGGCTGCTATTCTGAATCATGCGATTCCATTGTCCCAACAGTTAAAATATTACAAGGAATACCGAGGCAAGCTGGCCAAGGTAGTTGGCAGTAAAAAAGCAGCATTGATTATTAAGAATGCACTCTACATATTGAGTGCTGGCAGCAGTGACTTTGTGCAAAACTATTACGTCAATCCTTTGATCAACAAAGCCTTCACTCCTGATCAGTACTCTGCATACCTTGTTGGTTCATTTTCAAGCTTTGTTAAGGACTTGTATAAATTGGGAGCCAGGAAAGTTGGAGTGACTTCACTCCCACCTCTGGGTTGCCTACCTGCTGCAAGAACTTTATTTAGTTTCCATGAGAAAGGTTGTGTCTCGAGGATCAACAATGACACCCAAGGATTTAACAAGAAAATCAAGTCAGCTGCAGCAAATCTCCAAAAGCAACTTCCTGGTCTTAAGATTGTAGTCTTTGATATTTTCAAACCTCTCTATGACCTTGTTCAGTCCCCTTCAAAATTTGGTTTTGCGGAGGCAAGGAAAGGTTGCTGTGGTACTGGGATAGTGGAGACAACATCTTTATTGTGCAATCCAAAATCACTAGGAACTTGCTCTAATGCAACCCAATATGTGTTTTGGGACAGTGTCCATCCTTCACAAGCTGCTAACCAAGTTTTAGCCGATGCTTTGATTGTACAAGGCATAGCCCTTATCACTTAA 1062 0.4218 MNINSTEALLVLFAFVFLAWGNAQNTLVPAIITFGDSAVDVGNNDYLPTLFKANYPPYGRDFINHQPTGRFCNGKLATDITAETLGFKSYAPAYLSPQASGKNLLIGANFASAASGYDEKAAILNHAIPLSQQLKYYKEYRGKLAKVVGSKKAALIIKNALYILSAGSSDFVQNYYVNPLINKAFTPDQYSAYLVGSFSSFVKDLYKLGARKVGVTSLPPLGCLPAARTLFSFHEKGCVSRINNDTQGFNKKIKSAAANLQKQLPGLKIVVFDIFKPLYDLVQSPSKFGFAEARKGCCGTGIVETTSLLCNPKSLGTCSNATQYVFWDSVHPSQAANQVLADALIVQGIALIT* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3622 353 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 2 352 - -
Gso11g3622 353 CDD SGNH_plant_lipase_like 29 345 IPR035669 -
Gso11g3622 353 Pfam GDSL-like Lipase/Acylhydrolase 31 343 IPR001087 GO:0016788
Gso11g3622 353 Gene3D SGNH hydrolase 21 348 IPR036514 -
Gso11g3622 353 SUPERFAMILY SGNH hydrolase 31 344 - -
Gso11g3622 353 PANTHER GDSL ESTERASE/LIPASE EXL3 2 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3622 Gso-Chr11 51889860 51891682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3622 9 347 Pollen Coat Proteome AT1G75930 36.735 4.14e-62 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3622 - - gmx:100795716 702.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g3622 11 51889860 51891682 Gso7g0122 7 1112089 1114358 PCT
Gso11g3622 11 51889860 51891682 Gso8g1654 8 16202439 16204861 PCT
Gso7g0122 7 1112089 1114358 Gso11g3622 11 51889860 51891682 PCT
Gso8g1654 8 16202439 16204861 Gso11g3622 11 51889860 51891682 PCT