Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3620 ATGGTGCTCGTATATCTGTCATCCTACAGAATGCCGATGACTTTCTTCGTTGTGTTTTTGGGTGGTCTACTTACTCAAGCTCAGGATCAATCAGGATTTATCAGCATAGATTGTGGAGCTCCTGCAGATATCAACTATACTGAGCCAAAAACAGGCATAAATTACACATCAGATGCCAATTTCGTAAATACGGGTGTAAGTGGGACAGTAGAAACTGAAATCATCAGCAGTGGCTATCAACGACAGATGATGAATGTGAGAAGCTTCCCGGAAGGAAAAAGGAACTGCTACAAAATAAACATCACAAGAGGTTCTACTTATCTCATCCGGACTAATTTTTTGTATGGAAATTATGATGGGCTTAATAAGGCACCGCAGTTTGATATTCATCTTGGGGCTAACCGGTGGTATACAGTGACTATATCCAATGCATCCACTCCCCAAGTCAATGAGATCATATATGTACCTTCACTGGATTACCTACAAATCTGTCTGGTCGACACAGACCATGGGACACCATTTATATCAGCTATAGAATTGAGGACTTTGAAAAATGATACATACGTCACTCAATTTGGATCCTTGGAATATTACAACCGGTGGGATTTAGGTTCAAACAACAGCTACAGGTACAATCATGATGTTTATGATCGTTTCTGGTATATCTATGGTGACAACAAGGATTGGAAACAATTAAGAGCTTCTATTCCTGCCGATTCCTTAAACCAGAACGATTACAAACCGCCAGAGATTATCTTGAGTACCGCAGTTACACCAGTAAATGCTTCTGCTCCATTGGTAATAAGCTGGGAGCCACCAGATCAAACTGAGCTATACTATGTGTACATGCACTTCACTGAGATTCAAGTGTTAGCTAAGAATCAAACAAGAGAATTCAACATTGCCCAGAATGGAAAGCCATGGTATCAAAATATGTCTCCGCCATACCAGAATGTCACCACAATATATAGCAGGTTAGGCACCAGTGGAAAAAAAATTGAATATTCACTTGAGAAAACAAAGGATTCAAGCCTACCTCCCATCATAAATGCCATTGAAATTTACAGAGTAATAAACTTCCAGCAATCAGATACACACCAAGGAGATGTTGACGCGATTGCAACCATCAAGTCAGTTTATGGGATGACAAGAGATTGGCAAGGTGATCCATGCTCCCCTGTAGCCTACTTGTGGAATGGTTTGAATTGTACTTACCGCGGAAATGAGAACCCGAGAATCACAACTTTGAATTTATCTTCAAGCGAATTGTCAGGAATGATAGATCCTTCCATTTCATATCTCACCATGTTGGAGAAGTTGGATTTATCAAACAATAACTTAAATGGTGAAGTTCCTGATTTTCTATCTAGATTACAGCACTTGAAGATCATAAATTTAGATAACAACAACCTCACGGGTTCAATTCCATCAGAACTAGTTAAAAAATCTAAGGAAGGTTTCCTATCACTAAGTGTGGGCCAAAATCTGTATCTATGTGAATCTGGTCAATGCAACGAGAAGAAAAAGAAAAAGAACATTGTTACTCCCTTGTTAGCGTCAGTTAGTGGGGTTTTGATCCTTGTGGTGGCTGTGGCAGCTATATCGTGGACTCTTAAAAAGAGAAAGCCGAAAGAAAAGAATCAAAGTGAGATGTCAGCTCAATGCACAGAACAAGATGATTCATTACATCAATTCAAAAAACAAATATACTCACACTCTGATGTCCTTAGAATCACGAACAATTTCAATACAATTGTTGGTAAAGGTGGGTTCGGAACAGTTTATCTGGGTTATATCGATGGCACTCCAGTTGCAGTGAAAATGCTTTCTACCTCTTCAGTTCATGGTTATCAACAATTTCAGGCAGAAGTTAAACTTCTAATGAGAGTTCATCATGCAAATCTCACCTCCCTTGTTGGTTATTGTAATGAAGGAGACAATAAGGGTCTCATATATGAGTACATGGCTAATGGAAACTTACATGAACATCTGTCTGGTAAACACATCAAATCAAAATTCCTGACCTGGGAAGACAGACTTCGTATAGCAGTGGATGCAGCCTTAGGATTGGAGTACCTTCAAACTGGTTGCAAGCCTCCTATAATCCACAGAGACGTAAAATCTACAAACATCTTGTTGGATGAAAAGTTACAAGCAAAGTTATCTGATTTTGGTCTATCCAAAATTATCCCAATTGATGGGGGAACTCATGTGTCAACTGTTGTTGCTGGTACTCCAGGTTATCTAGATCCTGAGTACTACATATCCAATAGATTAACACAGAAAAGTGACATTTATGGCTTTGGAGTTGTTCTTCTAGAAATAATCACTTGTCAACCAGTAATAGCATGGAATGAAGAAAGGACTCACATAATTCAATGGGTTAGATCCCTGATTGGGATAGGGGATATCAAGGGCATTGTTGACTCAAGGTTAGAAGGAGATTTTGACATTAACTCAGCTTGGAAAGCCGTAGAAATAGCAATGGCGTGTGTTTCCTTAAATCCCAGTGAAAGGCCAATCATGAGGGTAATAGTGACTGAACTAAAGGAAACTTTAGCAACCGAATTAGCTCGAACTAAACACAACAGTGCTGATTCAATAAATTCAATCGAACCGGTCACCATGAATCTGGACACTGAATTCACTCCACTGGCTAGATAA 2664 0.3926 MVLVYLSSYRMPMTFFVVFLGGLLTQAQDQSGFISIDCGAPADINYTEPKTGINYTSDANFVNTGVSGTVETEIISSGYQRQMMNVRSFPEGKRNCYKINITRGSTYLIRTNFLYGNYDGLNKAPQFDIHLGANRWYTVTISNASTPQVNEIIYVPSLDYLQICLVDTDHGTPFISAIELRTLKNDTYVTQFGSLEYYNRWDLGSNNSYRYNHDVYDRFWYIYGDNKDWKQLRASIPADSLNQNDYKPPEIILSTAVTPVNASAPLVISWEPPDQTELYYVYMHFTEIQVLAKNQTREFNIAQNGKPWYQNMSPPYQNVTTIYSRLGTSGKKIEYSLEKTKDSSLPPIINAIEIYRVINFQQSDTHQGDVDAIATIKSVYGMTRDWQGDPCSPVAYLWNGLNCTYRGNENPRITTLNLSSSELSGMIDPSISYLTMLEKLDLSNNNLNGEVPDFLSRLQHLKIINLDNNNLTGSIPSELVKKSKEGFLSLSVGQNLYLCESGQCNEKKKKKNIVTPLLASVSGVLILVVAVAAISWTLKKRKPKEKNQSEMSAQCTEQDDSLHQFKKQIYSHSDVLRITNNFNTIVGKGGFGTVYLGYIDGTPVAVKMLSTSSVHGYQQFQAEVKLLMRVHHANLTSLVGYCNEGDNKGLIYEYMANGNLHEHLSGKHIKSKFLTWEDRLRIAVDAALGLEYLQTGCKPPIIHRDVKSTNILLDEKLQAKLSDFGLSKIIPIDGGTHVSTVVAGTPGYLDPEYYISNRLTQKSDIYGFGVVLLEIITCQPVIAWNEERTHIIQWVRSLIGIGDIKGIVDSRLEGDFDINSAWKAVEIAMACVSLNPSERPIMRVIVTELKETLATELARTKHNSADSINSIEPVTMNLDTEFTPLAR* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3620 887 ProSiteProfiles Protein kinase domain profile. 580 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3620 887 Pfam Malectin-like domain 36 357 IPR024788 -
Gso11g3620 887 PANTHER PUTATIVE-RELATED 23 887 - -
Gso11g3620 887 SUPERFAMILY Protein kinase-like (PK-like) 562 848 IPR011009 -
Gso11g3620 887 SUPERFAMILY L domain-like 374 480 - -
Gso11g3620 887 CDD STKc_IRAK 586 851 - -
Gso11g3620 887 ProSitePatterns Serine/Threonine protein kinases active-site signature. 701 713 IPR008271 GO:0004672|GO:0006468
Gso11g3620 887 Gene3D Transferase(Phosphotransferase) domain 1 655 875 - -
Gso11g3620 887 Gene3D Phosphorylase Kinase; domain 1 551 654 - -
Gso11g3620 887 Pfam Leucine rich repeat 411 471 IPR001611 GO:0005515
Gso11g3620 887 Pfam Protein kinase domain 584 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3620 887 SMART serkin_6 580 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3620 887 ProSitePatterns Protein kinases ATP-binding region signature. 586 607 IPR017441 GO:0005524
Gso11g3620 887 Gene3D Ribonuclease Inhibitor 371 487 IPR032675 -
Gso11g3620 887 PANTHER OS07G0107800 PROTEIN-RELATED 23 887 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3620 Gso-Chr11 51872037 51879847 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3620 13 887 Receptor kinase-like Gene Family AT1G51800 48.549 0.0 822
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gso11g3620 Malectin_like 1.4e-115 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3620 - - gmx:100795183 1733