Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3619 ATGGGAATGTCGAGGAGTTTCCTTGTTGGTTTTATAGGAGGTCTAGTTCTTGCAGTTCTGATTCAAGCTCAAGACCAATCAGGATTCATCAGCATAGATTGCGGAGCTCCTGCAGGTGTGAGCTATACTGAGTTGACCAGGACAGGCATAAATTATATTTCAGATGCAAATTTCATTGATACTGGTGTGAGTAGGAAAATAGTATCTGAACTCAAAAGTGTCTATCAACAACAGCTGTGGGATGTCAGAAGTTTTCCAGAAGGAAAAAGGAACTGCTACAAAATAAGCATCACAAGAGGTTCTACTTATCTCATCCGGACTAGTTTTTTGTATGGAAATTATGATGGGCTTAATACGGAACCGCAGTTTGATATTCATCTCGGGGCTAACCGGTGGGCTACAGTGATTATTTACAATGCAACCATTTACTATGCCAAGGAGATCATACATGTACCTTCACAGGATTATGTACAAATCTGTCTGGTTAACACTGGTCATGGGATACCATTTATATCAGCTATAGAATTGAGGACTTTGAAAAATGATACATACGTCACCCAATTTGGATCACTGGAAACTTACAACGATTACGAGCGGTGCGATTTAGGTTCAAACACAGGAGGCTACAGGTACAAGGATGATGTTTATGATCGTTTCTGGAATACTTGTGATTTTGACGAAGATTGGACACCAGTGCTAAATGCTTCGATTCCAGCTGATTCTTTAGAGCAGAACGATTACGAACCCCCAGCTATTGTCCTGAGCACCGCAGTTACACCAGCAAATGTTAGTGTTCCGTTGGTAATAAAATGGGTGCCACAAGATCCAACTGACCAATTCTATGTTTACATGCACTTCTTGGAGATTCAAGTGTTAGCAACGAACCAGACCAGACAATTCAGCATCACAGAAAATGGAAAGACATGGTTTCAAAACTTTTCTCCAGCGAACCTGGTTGTCGGCACTATATATAGCACGAAAGCCGTCAGCGGGAAACAAATCAAATATTCACTTGAGATGACAAAGAATTCAACCCTGCCTCCCATCATCAGTGCCATTGAAATTTACAGAGTAATAGACTTCCAGCAATCAGATACATTCCAAGGAGATGTTGATGCCATTACAGCCATCAAGTCAGTTTATGGGGTGACAAGAGATTGGCAAGGTGATCCATGCGCCCCTATAGACTACTTGTGGGATGGTCTGAATTGTACTTATCCCGGAAATGACTCCCCAAGAATCACAACTTTGAATTTATCTTCGAGTGGATTGTCAGGAAAGATAGACCCTTCAATTTTAAATCTCACCATGCTGGAGAATTTGGATTTATCAAATAATAGCTTAAAGGATGAAGTTCCCGATTTTCTGTCTCAATTACAACACTTGAAGATCCTGAACTTGGAGAAGAATAACCTCTCCGGTTCAATTCCCTCAACACTAGTTGAAAAATCTAAGGAAGGTTCCCTAGCACTAAGTGTGGGCCAAAATCCATATCTATGTGAATCTGGTCAATGTAACCAGAAGGAAAAAGAAAAAGAAAAGGGAAAGGACGAGAAGAGCATTGTTACACCCGTAGTAGCATCAGTTGGTGGGGCTGTGATCCTTCTGGTGGTCTTAGTAGCTATATTGTGGACCCTGAAAAGGAGAAAATCGAAAGCTCCGATGGTAGAGAAGGATCAAAGTCAGATCTCATTGCAATACACAGATCAAGATGATTCATTCCTGCAATCCAAAAAACAAATATATTCATACTCTGATGTCCTTAAAATCACCAACAATTTCAATGCAATTCTCGGTAAAGGAGGATTTGGAACAGTTTATCTGGGCTATATTGATGACACTCCAGTTGCAGTGAAAATGCTTTCCCCATCGTCTGTTCATGGTTATCAACAATTTCAAGCAGAGGTTAAACTTCTAATGAGAGTTCATCACAAATGTTTAACCTCCCTTGTTGGTTATTGCAATGAAGGAAACGATAAGTGTCTCATATATGAGTACATGGCTAATGGAAACTTACAAGAACATCTCACTGGTAAACGCAGCAAAACAAAATTCTTTACCTGGGAAGAAAGACTTCGTATAGCAGTGGATGCAGCTTTAGGATTGGAGTATCTGCAAAATGGTTGCAAGCCACCTATAATCCACAGAGACGTAAAATCTACAAACATCTTGTTGAATGAACACTTCCAAGCAAAATTATCTGATTTTGGTCTATCCAAAATTATCCCAACAGACGGGAGCACTCATGTCTCAACCGTTGTTGCTGGTACTCCTGGTTATCTGGACCCTGAGTACTACGTAACCAATAGATTAACAGAGAAGAGTGATGTTTATAGCTTTGGTGTTCTTCTTTTGGAGATAATCACAAGTCAACCAGTGATAATAAATAATAATCAAGAAAAAACTCACATAAGTCAATGGGTTAGCTCCTTGGTTGTGAAAGGTAATATCAAGGCCATTGTTGACTCAAGGTTAGAAGGAGACTATGATGGTAACTCAGTTTGGAAAGCGGTAGAAATAGCAACAGCATGTGTATCTTCAAATCCCAACACAAGGCCAATCATAAGTGTGATAGTGACTGAACTGAAAGAGTCTTTAGCAATGGAATTAGCTCGAACTAAATATAGTGGTGCTGATTCAAGAGATTTAGTTAAACAGGTCACCATGAATCTGATTACCGAATTTAGTCCTCAGGCCAGGTAA 2703 0.3996 MGMSRSFLVGFIGGLVLAVLIQAQDQSGFISIDCGAPAGVSYTELTRTGINYISDANFIDTGVSRKIVSELKSVYQQQLWDVRSFPEGKRNCYKISITRGSTYLIRTSFLYGNYDGLNTEPQFDIHLGANRWATVIIYNATIYYAKEIIHVPSQDYVQICLVNTGHGIPFISAIELRTLKNDTYVTQFGSLETYNDYERCDLGSNTGGYRYKDDVYDRFWNTCDFDEDWTPVLNASIPADSLEQNDYEPPAIVLSTAVTPANVSVPLVIKWVPQDPTDQFYVYMHFLEIQVLATNQTRQFSITENGKTWFQNFSPANLVVGTIYSTKAVSGKQIKYSLEMTKNSTLPPIISAIEIYRVIDFQQSDTFQGDVDAITAIKSVYGVTRDWQGDPCAPIDYLWDGLNCTYPGNDSPRITTLNLSSSGLSGKIDPSILNLTMLENLDLSNNSLKDEVPDFLSQLQHLKILNLEKNNLSGSIPSTLVEKSKEGSLALSVGQNPYLCESGQCNQKEKEKEKGKDEKSIVTPVVASVGGAVILLVVLVAILWTLKRRKSKAPMVEKDQSQISLQYTDQDDSFLQSKKQIYSYSDVLKITNNFNAILGKGGFGTVYLGYIDDTPVAVKMLSPSSVHGYQQFQAEVKLLMRVHHKCLTSLVGYCNEGNDKCLIYEYMANGNLQEHLTGKRSKTKFFTWEERLRIAVDAALGLEYLQNGCKPPIIHRDVKSTNILLNEHFQAKLSDFGLSKIIPTDGSTHVSTVVAGTPGYLDPEYYVTNRLTEKSDVYSFGVLLLEIITSQPVIINNNQEKTHISQWVSSLVVKGNIKAIVDSRLEGDYDGNSVWKAVEIATACVSSNPNTRPIISVIVTELKESLAMELARTKYSGADSRDLVKQVTMNLITEFSPQAR* 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3619 900 Gene3D Phosphorylase Kinase; domain 1 574 666 - -
Gso11g3619 900 ProSiteProfiles Protein kinase domain profile. 592 866 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3619 900 SUPERFAMILY Protein kinase-like (PK-like) 573 860 IPR011009 -
Gso11g3619 900 PANTHER OS07G0107800 PROTEIN-RELATED 15 900 - -
Gso11g3619 900 CDD STKc_IRAK 598 864 - -
Gso11g3619 900 Pfam Malectin-like domain 32 358 IPR024788 -
Gso11g3619 900 PANTHER PUTATIVE-RELATED 15 900 - -
Gso11g3619 900 SMART serkin_6 592 868 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3619 900 ProSitePatterns Protein kinases ATP-binding region signature. 598 619 IPR017441 GO:0005524
Gso11g3619 900 Gene3D Ribonuclease Inhibitor 372 491 IPR032675 -
Gso11g3619 900 Gene3D Transferase(Phosphotransferase) domain 1 667 885 - -
Gso11g3619 900 ProSitePatterns Serine/Threonine protein kinases active-site signature. 713 725 IPR008271 GO:0004672|GO:0006468
Gso11g3619 900 SUPERFAMILY L domain-like 394 481 - -
Gso11g3619 900 Gene3D - 202 359 - -
Gso11g3619 900 Pfam Protein tyrosine and serine/threonine kinase 594 862 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3619 Gso-Chr11 51859085 51865245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3619 1 900 Receptor kinase-like Gene Family AT1G51800 47.859 0.0 840
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gso11g3619 Malectin_like 2e-110 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3619 - - gmx:106794186 1693.32