Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3618 ATGGGAATGTCAAGGAGTTTCCTGGTTGGTTTTGTAGAAGGTCTAGTTCTTGCTGTTCTGATTCAAGCTCAGGACCAATCAGGATTCATCAGCATAGACTGCGGAGCTCCTGCAGATTTAAACTACACCGAGTCAACAACAGGCATAAATTATACTTCAGATGCAAATTTCATAAATACTGGTGTGAGTGGGACAATAGTATCTGAACTCAGAAATGACTATCAACGACCATACGAGAGTGTGAGAAGCTTCCCAGAAGGAAAAAGGAACTGCTACAAAATAAACATCACAAGAGGCTCTAAATATCTGATCAAGGCTGGTTTTTTGTACGGAAACTATGATGGCCTCAATATGTTACCAGAGTTTGATCTTCTTCTCGGGGCTAACTGGTGGGCTACAGTGAAGTTAGACAATGCCTCCCTTTTCCAAAGGAATGAGATCATATATGTACCTTCACTGGATTACGTGCAAATCTGTCTTGTCGACACAGGCTTTGGGACGCCATTTATATCAGCCATAGAATTGAGAACTTTGACAAATGATATTTATGTCACTGAATTTGGATTATTGGAAACTTACTACCGGGGTGATTTAGGATCAAACAAAGGCTACAGGTACAAGGACGACATTTATGATCGTTTCTGGAACATTGGCAACACCAATAAGTGGACAAACTTAAGTGCTTCGGTTCCTGCTGATGATTTAGACTTAAACCAGAACATATACCAACCGCCAGCTATTGTCATGAGCACTGCAGTTACACCAGCAAATGTTAGTGCTCCATTGGTAATAAGCTGGGTGCCAGATGATCCAACTGACCAATTCTATGTTTACTTGTACTTCATGGAGATTCAAGAGTTAGAGACTAATCAGACAAGAGAATTCAACATCAAGGAAAATGGTAAGCTAAGGTATTCAAAATTTTCACCACTGAATCAGCTTGTCACCACTTTATATAGCTCGTCAAGCTCCAGTGGGAAAGAAATGACATATTCCCTTGAAAAGACCAAAAATTCAACCCTGCCCCCCATCATCAATGCCATCGAGATTTACAAAGTAAAAGACTTCCCGCAATCAGATACATTCCAAGGAGATGATGATGCGATTACAACCATCAAGTCAGTTTATGGGGTGACAAGAGATTGGCAAGGTGATCCATGCGCCCCTGTAGCCTACTTGTGGGATGGTTTGAATTGTAGTTATCTCGGAAAAGAGTCCCCAAGAATCACAACTTTGAATTTATCTTCAAGTGGATTGTCAGGAAAGTTAGACCCTTCAATTTCAAAGCTCACCATGTTGGAGAAGTTGGATTTATCAAACAACAGCTTAAACGGTGAAATTCCTGATTTTCTGTCTCGATTACAACACTTAAAGATCTTAAACTTGGAGAAGAATAACCTCTCTGGTTCAATTCCCTCAGCACTTGTTGAAAAATCAAAGGAAGGCTCCCTGTCACTAAGTGTGGGCCAAAATCCAAATCTATGTGATTCTGGCCAATGCAACGAGAAGGAGAAGGAAAAGAAGAACATCGTTACACCCTTAGTAGCATCAATTAGTGGGGTTGTGATCCTTCTGGTGGTCGTGGCAGCTATACTGTGGACCCTTCAAAGGAGAAAATCAAAAGCTTTAATGGTAGAAAGGGATCAAAGTCAGATCTCACAGCCGTACACAGAACAAGATGATTCATTACTGGAATTAAAGAAACAAATATATTCATACTCTGATGTCCTTAAAATCACCAACAATTTCAATACAACTCTTGGTAAAGGAGGATTTGGAAAAGTTTATCTGGGCCATATAGATGACACTCCAGTTGCAGTGAAAATGCTTTCCCCATCGTCTGTTCATGGTTATCAACAATTTCAAGCAGAGGTTAAACTTCTAATGAGAGTTCATCATAAAAATTTGACTTCCCTTGTTGGTTATTGTAATGAAGGAACCAATAAGGGTCTCATATATGAGTACATGGCTAATGGAAACTTGCAAGAACATCTCTCTGGTAAACACAGCAAAACAAAATTCTTCACCTGGGAAGAAAGACTTCGTATAGCAGTGGATGCAGCCTCAGGATTGGAGTATCTGCAAAATGGTTGTAAGACACCTATAATCCACAGAGATGTAAAATCCACAAACATCTTGTTGAACGAAAACTTCCAAGCAAAATTATCTGATTTTGGTCTATCCAAAATTATCCCAACAGATGGGGTAACTCACGTGTCAACTGTTGTTGCTGGTACTCCTGGTTATTTGGACCCTGAGTATTTCATAACCAATAGATTAACCGAGAAAAGCGATGTTTATAGCTTTGGTGTTGTTCTTTTGGAGATAATCACAAGTCAGCCAGTGATAGCAAGGAAAGAAGAAAGCATTCACATAAGCGAATGGGTTAGCTCCTTGATTGCTAAAGGGGATATCGAGGCCATTGTTGACCCAAGGTTAGAAGGAGATTTTGACAGTAACTCAGTTTGGAAAGCAGTAGAAATAGCAACAGCTTGTTTATCTCCAAATATGAACAAGAGGCCAATCACAAGTGTGATAGTGATTGAACTGAAGGAGTCTTTAGCAATGGAATTAGCTCGAACTAAATATAGTGGTGTTGAAACAAGAGATTCAATTAAAACGGTCACCATGAATCTTAATACCGAATTTAGTCCCCAGGCCAGGTAA 2667 0.3982 MGMSRSFLVGFVEGLVLAVLIQAQDQSGFISIDCGAPADLNYTESTTGINYTSDANFINTGVSGTIVSELRNDYQRPYESVRSFPEGKRNCYKINITRGSKYLIKAGFLYGNYDGLNMLPEFDLLLGANWWATVKLDNASLFQRNEIIYVPSLDYVQICLVDTGFGTPFISAIELRTLTNDIYVTEFGLLETYYRGDLGSNKGYRYKDDIYDRFWNIGNTNKWTNLSASVPADDLDLNQNIYQPPAIVMSTAVTPANVSAPLVISWVPDDPTDQFYVYLYFMEIQELETNQTREFNIKENGKLRYSKFSPLNQLVTTLYSSSSSSGKEMTYSLEKTKNSTLPPIINAIEIYKVKDFPQSDTFQGDDDAITTIKSVYGVTRDWQGDPCAPVAYLWDGLNCSYLGKESPRITTLNLSSSGLSGKLDPSISKLTMLEKLDLSNNSLNGEIPDFLSRLQHLKILNLEKNNLSGSIPSALVEKSKEGSLSLSVGQNPNLCDSGQCNEKEKEKKNIVTPLVASISGVVILLVVVAAILWTLQRRKSKALMVERDQSQISQPYTEQDDSLLELKKQIYSYSDVLKITNNFNTTLGKGGFGKVYLGHIDDTPVAVKMLSPSSVHGYQQFQAEVKLLMRVHHKNLTSLVGYCNEGTNKGLIYEYMANGNLQEHLSGKHSKTKFFTWEERLRIAVDAASGLEYLQNGCKTPIIHRDVKSTNILLNENFQAKLSDFGLSKIIPTDGVTHVSTVVAGTPGYLDPEYFITNRLTEKSDVYSFGVVLLEIITSQPVIARKEESIHISEWVSSLIAKGDIEAIVDPRLEGDFDSNSVWKAVEIATACLSPNMNKRPITSVIVIELKESLAMELARTKYSGVETRDSIKTVTMNLNTEFSPQAR* 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3618 888 SMART serkin_6 581 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3618 888 ProSiteProfiles Protein kinase domain profile. 581 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3618 888 Pfam Malectin-like domain 32 353 IPR024788 -
Gso11g3618 888 Gene3D Phosphorylase Kinase; domain 1 564 655 - -
Gso11g3618 888 CDD STKc_IRAK 587 852 - -
Gso11g3618 888 Gene3D Ribonuclease Inhibitor 368 487 IPR032675 -
Gso11g3618 888 SUPERFAMILY Protein kinase-like (PK-like) 560 844 IPR011009 -
Gso11g3618 888 PANTHER OS07G0107800 PROTEIN-RELATED 15 888 - -
Gso11g3618 888 SUPERFAMILY L domain-like 392 478 - -
Gso11g3618 888 Gene3D Transferase(Phosphotransferase) domain 1 656 872 - -
Gso11g3618 888 Pfam Protein tyrosine and serine/threonine kinase 583 790 IPR001245 GO:0004672|GO:0006468
Gso11g3618 888 PANTHER PUTATIVE-RELATED 15 888 - -
Gso11g3618 888 ProSitePatterns Serine/Threonine protein kinases active-site signature. 702 714 IPR008271 GO:0004672|GO:0006468
Gso11g3618 888 ProSitePatterns Protein kinases ATP-binding region signature. 587 608 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3618 Gso-Chr11 51851818 51856842 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3618 1 888 Receptor kinase-like Gene Family AT1G51800 49.668 0.0 875
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gso11g3618 Malectin_like 1.3e-111 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3618 - - gmx:106794186 1394.79