Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3617 ATGGAAGGACACTTTCTATTTCTGATGTTTCATCTCTCTTTAACTCTTCCTATCATTGTTCGAGCACAGAATCAATCAGGCTTCATTAGTATTGACTGCGGACTTGAGGATGAACCAAACTACACAGATGAAACCACTTCCATCTATTACTCTTCGGATGTCAACTTCACAAACAGTGGTGTAAGCCACAGTATATCATCTAAATACAAGGCTTCCCTTGACAGGCAGTTCTGGAATGTTAGAAGCTTCCCGGATGGAACCAGGAACTGCTATACCCTTGTTGTTCCTCAAGTAAGTAGCAAGAAATATTTAGTGAGGGCAAGGTTTGCATATGGAAATTACGATGGAAAAGACTCTCTTCCCGAGTTTGACATCTATCTTGGAGACAGTTGGTGGGGATCAGTGGTGTTTCAGGATGCATCCAGTGTAGTCACCAAGGAAATCATTTATGCTGCTTCATCCAATTATGCTCATGTTTGTTTATTCAACACTGCAAAGGGTACACCCTTTATTTCAGTTTTAGAGCTTAGAGTTCTTAACAGTGAGGCCTATCTAGTTAACTTTGTGGAGCTATTGGCACGATTTGACGTAGGCTTACAGGATGGTGAAATAATCAGATATCCGGATGATGTCTATGATAGAATATGGACACCTTATAACTCAAATGAATGGACACAGATAGATAACACCCTTACCATAGACCATGATGCTACTACGTCATTTGATTTTTTACCATTGCCGCCTTCCATTGTCATGGGAACTGCAGCAATTCCAGCAAATGTCAATGACAATATAGAATTCCACTTCCTTCCCAAAAATAATGCATCCACATGTTATGTGTACATGTTCTTTGCTGAACTACAGAAGCTCCAGGCAAACCAAATTAGAGAGTTCAACATTTTTGTAAATGGGGACATTTTAAATAATGCTCCAATCAATCCTATATACCTGCAGAATGCGTATCATTTAGCAATAATTGAAAATCCGTTGGAACTTTGGATTAATAAAACTAGTGGATCGACTCTTCCACCTCTTCTCAACGCCATCGAGATATACATGACAAAAAACTTCTCACTATCAGAAACATATCAAACAGATGTTGATGGTATCATAAATGTCAAGTCAATCTATGGGATCAAGAGAAACTGGCAAGGAGATCCTTGTACCCCACTGGCTTACTTGTGGGATGGTCTTAACTGCAGCTATGCTGAATCTGATTCACCAAGGATCATATACTTGAACTTATCTTTCAGTGGTTTAATAGGAAACATAGCCCCTGGCATATCAAATCTGCAGTCCATTGAATATTTGGATTTGTCAAACAACAATTTGACTGGGGCCGTGCCTGAATTCCTATCCCAACTGCGCTTCTTAAGAGTTCTGAACCTAGAAGGAAATCAGCTATCAGGAACAATTCCAATGCAACTCATTGTAAATTCCGAGAATGGTTTGCTTGAATTCATTTTTGGTGGAAATCCAAGTCTTTGCTCACCAGGTTCATCATGCAACAACAAGAATGGGAATAAGGTTGTAGTTCCACTGGTGGCATCACTTGGTGGAGCTTTCATGATACTAGTAATAACAGTGATTTCTTTCTGCATATACAAAAGGAGACAACCAGTTTCCCATCATCTCAGCAAGCAGAATGCTTATTACAAAATAAGGGAGGAACTAGAGTCAAATAAACAAGAATTCACCTATGCCGAAGTCTTGAGCATGACCAGAAATTTTGAAAGGGTTGTTGGGAAAGGAGGATTTGCTACAGTGTACCATGGCTGGATAGATGATACTGAGGTAGCTGTCAAAATGCTCTCTCCCTCAGCTCAAGGATATCTGCAATTTCAGGCAGAGGCCAAACTTCTTGCTGTAGTTCATCATAAATTCTTGACTGCTCTGATAGGATATTGTGATGATGGCGAAAATATGGCTCTCATCTATGAGTATATGGCTAATGGAGACTTAGCAAAGCATTTATCAGGCAAAAGCAAAAATATATTGAGTTGGAACCAACGAATTCAAATTGCAGTGGATGCTGCAGAAGGATTGGAGTACCTGCATCATGGCTGCAATATGCCGATTGTTCACAGAGATGTTAAGTCTAAAAACATCTTACTGAATGAAAAATTCCGGGGTAAACTAGCTGATTTTGGGTTGTCAAAGATCTACTCAGATGAAGATGACACCCATATGACCACAGTGGTAGCTGGCACCCTTGGATATCTTGACCCAGAGTACAATAGATCACACAAATTGAGGGAAAAAAGTGATGTTTTCAGTTTTGGGATAGTTTTGTTTGAGATAATTACAGGTCAACCTGCTATAACCAAAACCGAAGAGAGAACTCACATAATTCAATGGGTTGATTCTATACTGCTTGAAAGGGGGATCAATGATATTGTGGATTCAAGATTGCAGGGAGAATTTGATATTCATCATGTGAAGAAGGCCTTAGACACTGCAAAGGCTTGTGTAGCAACCACTTCCATTAATAGGCCAACCATGACCCATGTAGTTAATGAATTGAAACAATGTTTCTCAAAAATGATGACAACTCCGTCTAATTCTGACGATCATGAGAGTTCACCCAACAGCTTTATCACAGTCTCCTTTGATGGAATTAGTGGACAGAGCTCTCTACAAAGATAG 2646 0.3964 MEGHFLFLMFHLSLTLPIIVRAQNQSGFISIDCGLEDEPNYTDETTSIYYSSDVNFTNSGVSHSISSKYKASLDRQFWNVRSFPDGTRNCYTLVVPQVSSKKYLVRARFAYGNYDGKDSLPEFDIYLGDSWWGSVVFQDASSVVTKEIIYAASSNYAHVCLFNTAKGTPFISVLELRVLNSEAYLVNFVELLARFDVGLQDGEIIRYPDDVYDRIWTPYNSNEWTQIDNTLTIDHDATTSFDFLPLPPSIVMGTAAIPANVNDNIEFHFLPKNNASTCYVYMFFAELQKLQANQIREFNIFVNGDILNNAPINPIYLQNAYHLAIIENPLELWINKTSGSTLPPLLNAIEIYMTKNFSLSETYQTDVDGIINVKSIYGIKRNWQGDPCTPLAYLWDGLNCSYAESDSPRIIYLNLSFSGLIGNIAPGISNLQSIEYLDLSNNNLTGAVPEFLSQLRFLRVLNLEGNQLSGTIPMQLIVNSENGLLEFIFGGNPSLCSPGSSCNNKNGNKVVVPLVASLGGAFMILVITVISFCIYKRRQPVSHHLSKQNAYYKIREELESNKQEFTYAEVLSMTRNFERVVGKGGFATVYHGWIDDTEVAVKMLSPSAQGYLQFQAEAKLLAVVHHKFLTALIGYCDDGENMALIYEYMANGDLAKHLSGKSKNILSWNQRIQIAVDAAEGLEYLHHGCNMPIVHRDVKSKNILLNEKFRGKLADFGLSKIYSDEDDTHMTTVVAGTLGYLDPEYNRSHKLREKSDVFSFGIVLFEIITGQPAITKTEERTHIIQWVDSILLERGINDIVDSRLQGEFDIHHVKKALDTAKACVATTSINRPTMTHVVNELKQCFSKMMTTPSNSDDHESSPNSFITVSFDGISGQSSLQR* 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3617 881 Pfam Protein tyrosine and serine/threonine kinase 577 841 IPR001245 GO:0004672|GO:0006468
Gso11g3617 881 PANTHER TYROSINE KINASE FAMILY PROTEIN 2 881 - -
Gso11g3617 881 Gene3D Ribonuclease Inhibitor 371 484 IPR032675 -
Gso11g3617 881 Gene3D Transferase(Phosphotransferase) domain 1 649 866 - -
Gso11g3617 881 Pfam Leucine rich repeat 412 468 IPR001611 GO:0005515
Gso11g3617 881 Gene3D Phosphorylase Kinase; domain 1 557 648 - -
Gso11g3617 881 SMART serkin_6 575 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3617 881 ProSitePatterns Protein kinases ATP-binding region signature. 581 602 IPR017441 GO:0005524
Gso11g3617 881 SUPERFAMILY L domain-like 370 495 - -
Gso11g3617 881 Pfam Malectin-like domain 31 353 IPR024788 -
Gso11g3617 881 ProSitePatterns Serine/Threonine protein kinases active-site signature. 693 705 IPR008271 GO:0004672|GO:0006468
Gso11g3617 881 ProSiteProfiles Protein kinase domain profile. 575 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso11g3617 881 PANTHER OS07G0107800 PROTEIN-RELATED 2 881 - -
Gso11g3617 881 SUPERFAMILY Protein kinase-like (PK-like) 559 841 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3617 Gso-Chr11 51845729 51850502 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3617 18 847 Receptor kinase-like Gene Family AT2G19210 47.163 0.0 769
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gso11g3617 Malectin_like 5e-98 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3617 - - gmx:100778537 1780.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g3617 11 51845729 51850502 Gso7g0118 7 1069039 1074215 PCT
Gso11g3617 11 51845729 51850502 Gso8g1642 8 16046974 16056409 PCT